Gene RPB_4655 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4655 
Symbol 
ID3912473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp5265864 
End bp5266685 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content66% 
IMG OID637886560 
ProductAlpha/beta hydrolase 
Protein accessionYP_488249 
Protein GI86751753 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.875827 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCGC TCGCGCCGCA AGGCCATCTC ACCATCGGCG AGCACCAGCT CGAATATCGC 
ATAATCGGGC CGTCTCCCGA CGAGGCACCG ACGCTGGTAC TGCTACACGA GGGCCTCGGC
TGCGTCGGGC TGTGGGGCGA CTTTCCCGAT AAGCTGGCGG CTGCGACCGG TGCCGGCGTG
TTCGTGTATT CGCGCGCCGG TTACGGCCAG TCGAGTCCGG CCGCGCTGCC GCGCAAGGTC
GACTACATGC ACCGCGAAGC ACTCGACGTG CTGCCGCAGT TGCTCGATTC GATCGGCTTT
CGTCGCGGCC TGCTGATCGG CCATTCCGAC GGCGCCTCGA TCGCGGCGAT CTATGCAGGC
GGCGTGCCGG ATCATCGCGT TCGCGGTGTC TCGCTGATCG CGCCACATTT CGTCGTCGAG
GACATTTCGG TCCAATCGAT CGCGGAGATC AAGACCGCCT ATGAGACCAC CGAACTGCGT
GCCAAGCTGG CGCGTTGGCA CAGCGACGTC GACAACGCCT TCTATGGCTG GAACGGCGCG
TGGCTCGATC CGGCGTTCCG CGCCTGGGAC ATTTCCGATC ACCTCGCCTA CATCCGCGTG
CCGCTGCAGA TCGTGCAGGG CGCCGACGAT CAGTACGGCA CGCGGCGGCA GATCGAGATC
GCCGAGGCCG AGTGCTACTG CCCGGTCGAG ACGGTGATCC TGCGCAACAC TGGCCACGCG
CCGCATCGCG AGGCCGCCGA GGCGACGCTG GGTGCCGTTG CGGATTTCGC CAATCGCCTT
CTGCAGGGCC ACGGCGAGGC CGCACACGGG CAAGCCGCTT GA
 
Protein sequence
MTSLAPQGHL TIGEHQLEYR IIGPSPDEAP TLVLLHEGLG CVGLWGDFPD KLAAATGAGV 
FVYSRAGYGQ SSPAALPRKV DYMHREALDV LPQLLDSIGF RRGLLIGHSD GASIAAIYAG
GVPDHRVRGV SLIAPHFVVE DISVQSIAEI KTAYETTELR AKLARWHSDV DNAFYGWNGA
WLDPAFRAWD ISDHLAYIRV PLQIVQGADD QYGTRRQIEI AEAECYCPVE TVILRNTGHA
PHREAAEATL GAVADFANRL LQGHGEAAHG QAA