Gene RPB_4569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4569 
Symbol 
ID3912386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp5168161 
End bp5168784 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content67% 
IMG OID637886473 
ProductDSBA oxidoreductase 
Protein accessionYP_488163 
Protein GI86751667 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3917] 2-hydroxychromene-2-carboxylate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCGTC AGATCGACTA CTATTTCTCG TTCCAGTCGC CCTGGGCCTA TATCGGCCAC 
AAGGCGTTCC GACAGCTTGT CGAAGCGCAC GACCTCGCGG TCGTCTACAA GCCGGTGCTG
CTGGCTGGGC TGTTCTCCGA AACCGGCGGC CTGCCGCTCG CCAAGCGTCA TCCGGCGCGG
CAGCGCTATC GGCTGGTCGA ATTGCAGCGC TGGCGCGACA AGCGCGGGCT GGATTTCAAA
TTGTGGCCGA AGCACTGGCC GTTCGATGCC CGTCTCGCCG ATGGCGTGGT GCTGGCCGCG
CTGGCGGCCG GGCTCGATCC CGAACCCTAT CTGCAACGGG CCTATCCTGC GGTGTGGGAG
CAGGAACTCG ATCTCGCGGA TGTCGCCGTC GTGACGCGCC TCGCCGACGA GGCCGGCCTG
CCGGGCGAAA AGCTGGCGGC GCACGCGGCG TCGGATCAGA TCCGCGCCGC CTATGAGCAG
AACCGCCACG ACGCGATGGC CGCGGATGTG TTCGGCTCGC CGGCCTATGT GCTCGACGGC
GAAGTGTTCT GGGGACAGGA CCGGATCGAA TTGCTGGCCG ATGCGTTGAA ATCCGGCCGC
GGCCCGTACC GTCCGCCGGC CTGA
 
Protein sequence
MSRQIDYYFS FQSPWAYIGH KAFRQLVEAH DLAVVYKPVL LAGLFSETGG LPLAKRHPAR 
QRYRLVELQR WRDKRGLDFK LWPKHWPFDA RLADGVVLAA LAAGLDPEPY LQRAYPAVWE
QELDLADVAV VTRLADEAGL PGEKLAAHAA SDQIRAAYEQ NRHDAMAADV FGSPAYVLDG
EVFWGQDRIE LLADALKSGR GPYRPPA