| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4539 |
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| Symbol | |
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| ID | 3912356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 5133173 |
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| End bp | 5134183 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637886443 |
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| Product | KpsF/GutQ family protein |
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| Protein accession | YP_488133 |
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| Protein GI | 86751637 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[T] Signal transduction mechanisms |
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| COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation
[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
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| TIGRFAM ID | [TIGR00393] KpsF/GutQ family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.937702 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCTTT CAAAACCCCG TACGACAAAA CCCGCGATGA CAGATTCAGC CGCCGCGATC
CCCTCGGCCC TGCGCACGCT GGAGGCCGAA GCCGACGGCG TCACCGCGCT CGCCGCAGCG
CTGCGATCCG ACCTCGGCAG CGCCTTCGCG GCGGCGATCG AGACCATCCG CAACGCCAAG
GGCCGGCTGA TCATCACCGG GCTCGGCAAA TCCGGACATA TCGGCCGCAA GATCGCCGCG
ACCTTCGCCT CGACCGGCAC GCCGGCGTTC TTCGTCCACG CCTCCGAAGC CAGCCACGGT
GATCTCGGCA TGATCACCGC CGACGACATT ATTCTCGCGA TGTCGTGGTC CGGCGAGCAG
CCGGAAATGA AGAACCTGAT CTCTTACGCC AAGCGGTTCA GGATCGCGCT GATCGCGATG
ACCTCCGACT CGGGCTCGAC GCTGGCCAAG GCCGCGGATA TCTCGCTGAC GCTGCCGAAG
GCGCGCGAGG CCTGCCCGCA CAATCTGGCG CCGACCACCT CGTCGCTGAT GATGCTGGCG
CTCGGCGACG CGATCGCGAT CGCGCTGCTG GAGAGCCGCG GCTTCACCTC GACCGATTTC
AGCGTGCTGC ATCCCGGCGG CAAACTCGGC GCGATGCTGA AATACGCCCG CGACCTGATG
CACACCGGTG ACGCCGTGCC GCTGAAGCCG CTCGGCACCA AGATGTCGGA TGCACTGGTC
GAGATGTCGG CCAAGGGCTT CGGCTGCGTC GGCATCGTCG ACGCCAGCGG CGCCGTCGCC
GGCATCGTCA CCGACGGCGA TCTGCGCCGC CACATGCGCC CCGATCTGAT GACCGCGACC
GTCGACGAGG TGATGACCAA GCGGCCGAAG ACGATCAGCC CCGGCCTGCT CGCCGGCGAG
ACGCTGGAAT TGCTGAACTC CTCGAAGATC ACCGCGCTCC TGGTGACCGA AGGCAACAAG
CCGGTCGGCA TCGTGCATCT GCACGACCTG CTGCGGGCGG GCGTGGCGTA G
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| Protein sequence | MALSKPRTTK PAMTDSAAAI PSALRTLEAE ADGVTALAAA LRSDLGSAFA AAIETIRNAK
GRLIITGLGK SGHIGRKIAA TFASTGTPAF FVHASEASHG DLGMITADDI ILAMSWSGEQ
PEMKNLISYA KRFRIALIAM TSDSGSTLAK AADISLTLPK AREACPHNLA PTTSSLMMLA
LGDAIAIALL ESRGFTSTDF SVLHPGGKLG AMLKYARDLM HTGDAVPLKP LGTKMSDALV
EMSAKGFGCV GIVDASGAVA GIVTDGDLRR HMRPDLMTAT VDEVMTKRPK TISPGLLAGE
TLELLNSSKI TALLVTEGNK PVGIVHLHDL LRAGVA
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