| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4512 |
|---|
| Symbol | |
|---|
| ID | 3912328 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 5100183 |
|---|
| End bp | 5101169 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637886415 |
|---|
| Product | molybdopterin dehydrogenase, FAD-binding |
|---|
| Protein accession | YP_488106 |
|---|
| Protein GI | 86751610 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1319] Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.195104 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.684454 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCCTT TCGATTATTC CCGGGCCGGC GATGTCGCCG AAGCGCTGCG GGCCGGCGCC
GGCGTGCAGA CCAAGTTTCT CGGCGGCGGC ACCAATCTGA TCGACCTGAT GCGGGAAACG
ATCGAGCGCC CGGCGGCGCT GGTCGATATC ACCGGTCTGC CGGCCGAGAT CACCGCGCGC
GACGACGGCG GCCTGCTGAT CGGCGCGGCG GTGCGCAACA CCGCGCTGGC CGAGCACCGC
GCCGTGCGGA CGCGCTATCC GATGCTGTCG CGCGCCATTC TGGCGGGCGC CTCGGCGCAG
ATCCGCAACA TGGCGACGGT CGGCGGCAAT CTGCTGCAGC GGACGCGCTG CGCTTACTTC
TACGACGATG CCGGCTCGCG CTGTAACAAG CGCCAACCGG GGCAAGGCTG CGATGCCATC
GACGGCTTCA ACCGCAACCA CGCCATCCTC GGCGCGTCGG AGTCGTGCGT GGCGACGCAT
CCGTCGGACA TGTGCGTGGC GCTCGCCGCG CTCGATGCGG TGGTGCATCT CGCCGGCAGC
GGCGGCCAGC GCACGTTGCC GTTCAACGAC GTCCATCGGC TGCCGGGCGA TCGGCCGGAC
CTCGAAACCA TGCTGCGGCC CGGCGAACTG ATCACCGCGA TCGAACTGCC GGCGCAGCCG
ATCGCGGCGC GCTCGACCTA TCGCAAGGTG CGCGACCGCT CGAGCTACGC GTTCGCGCTG
GTCTCGGTCG CGGCCGCGGT GGAGGTCGAG CGCGGCAGCG TCAAGGATTT GCGGCTGGCG
CTCGGCGGCG TCGCGCACAA GCCGTGGCGC GCGCACAAGG CCGAGCAGGC GCTGCGCGGC
GGTCCCGCCA CGGTCGAGGC GTTTCGCGCC GCGGCCGAGG CCGAACTCGC CGACGCCGTG
CCGCTTCGCG ACAACGGCTT CAAGATCGAA CTGGCAAAGC GCACCATTAT TGCCGTGCTC
GGCGAACTGG CAGGAGTGGC CCGATGA
|
|---|
| Protein sequence | MTPFDYSRAG DVAEALRAGA GVQTKFLGGG TNLIDLMRET IERPAALVDI TGLPAEITAR
DDGGLLIGAA VRNTALAEHR AVRTRYPMLS RAILAGASAQ IRNMATVGGN LLQRTRCAYF
YDDAGSRCNK RQPGQGCDAI DGFNRNHAIL GASESCVATH PSDMCVALAA LDAVVHLAGS
GGQRTLPFND VHRLPGDRPD LETMLRPGEL ITAIELPAQP IAARSTYRKV RDRSSYAFAL
VSVAAAVEVE RGSVKDLRLA LGGVAHKPWR AHKAEQALRG GPATVEAFRA AAEAELADAV
PLRDNGFKIE LAKRTIIAVL GELAGVAR
|
|---|
| |