Gene RPB_4507 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4507 
Symbol 
ID3912323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp5094274 
End bp5094762 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content71% 
IMG OID637886410 
Productflavin reductase-like, FMN-binding 
Protein accessionYP_488101 
Protein GI86751605 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.657354 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.212557 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGCG CCGATCCGGA GCGGTTTCGC GCGGCGGCGT CACGCTTCGC CACCGGCGTG 
ACGGTGATCA CGGCGCTCGA CCGAGACGGC GAGGTCTGCG GCATGACGGT GAACAGCTTC
GTCACCGTGA CGCTGTCGCC GCCGACGGTG CTGTTCCTGG CGAAGCCCGG CCGTACCCGG
GCGGCGATCA CGGCGAGCGG CCGCTACGGC GTCAACGTGC TGGCGGACAC CGCGGCAGCG
CTGTCCAGCC ACTTCGCCGG CCGCGGCGCT GCCCGCCACG ACCTTCGCTA CGAATGGACC
GACGCGCTGC CGCGGCTGCC CGACTGTCTC GCCTTCTTCG CCTGCAGCCT GGTGCGACAG
ATCGAGCTCG GCGATCATCT GATGCTGATC GCCGAGGTCA CCGCCTGCGA TCATCGCGAC
GACGCACCGC TGGTGTTCTT CGGCAGCCGC TATCACGCCG GCGCCGGTGT GCCGGCGCTC
GACGCCTGA
 
Protein sequence
MPRADPERFR AAASRFATGV TVITALDRDG EVCGMTVNSF VTVTLSPPTV LFLAKPGRTR 
AAITASGRYG VNVLADTAAA LSSHFAGRGA ARHDLRYEWT DALPRLPDCL AFFACSLVRQ
IELGDHLMLI AEVTACDHRD DAPLVFFGSR YHAGAGVPAL DA