Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_4503 |
Symbol | |
ID | 3912319 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 5090807 |
End bp | 5091634 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637886406 |
Product | hypothetical protein |
Protein accession | YP_488097 |
Protein GI | 86751601 |
COG category | [C] Energy production and conversion [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4233] Uncharacterized protein predicted to be involved in C-type cytochrome biogenesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.217777 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCGCAA TCGTTCCGCT CCGCGCGGCC CTGCTCACCG CTCTCCTCGT CGTCTGCGCC GGCGCGCGCG CCGACGACGC CTCGCCGTGG ATCAATGAAC CCTATTCCGC CGTGCGGCTG CTCGCCGGGT CGCGCAGCGG CGCGGTGCTG CTGGGTGGAA TTGCGTTCCA GTTGCAGCCG GGCTGGAAGA CCTATTGGCG CACCCCGGGC GATTCCGGCG TGCCGCCGCG GTTCGACTTC TCCAAGTCCG ACAATGTCGA GGCGGTGACG ATCCTGTGGC CGGCGCCGAC GGCCTTCCCC GACGGTGCGG GCGGCACGTC GCTCGGCTAC GAGTCGCATG TCGTGCTGCC GCTGCGCATT GTGGCGAAGA ATGCCGACAA GCCGGTGACG CTGCGCGCCG CGATCAGCTA CGCGGTGTGC GAGAAGCTGT GCGTTCCGGT CGAAGCCAGT GCCGAACTCG CCTTCAACAA CGTGGCGAGT ACGCAGGACA GCGCGCTCGC CGCGGCGCTC GACACCGTTC CGGTACCGGC CAATGTCGGC GATCCCAATC CGCTGACGAT CCGCGACGTG GTGTTGCGCG GCGATACCGA AGTGTGGGTC GATGTCGTCG CGCCTCCGGC GAACGAGGTC CGCCTGTTCG TCGAAGGCCC GACGCCGGAC TGGGCGCTGC CGATCCCGAA ACGGAGTCCG AATGCACCGG AGGGCGTGCA ACGCTTCACC TTTCCCCTCG AAGGTCTGCC TTCGGGCGCG CATGCCGAAG GCGCGGCGCT GAAATTCACC CTGGTCGGGC CGGAGAAATC CTACGAGTTC AACGTCAATC TGAACTGA
|
Protein sequence | MIAIVPLRAA LLTALLVVCA GARADDASPW INEPYSAVRL LAGSRSGAVL LGGIAFQLQP GWKTYWRTPG DSGVPPRFDF SKSDNVEAVT ILWPAPTAFP DGAGGTSLGY ESHVVLPLRI VAKNADKPVT LRAAISYAVC EKLCVPVEAS AELAFNNVAS TQDSALAAAL DTVPVPANVG DPNPLTIRDV VLRGDTEVWV DVVAPPANEV RLFVEGPTPD WALPIPKRSP NAPEGVQRFT FPLEGLPSGA HAEGAALKFT LVGPEKSYEF NVNLN
|
| |