| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4475 |
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| Symbol | |
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| ID | 3912291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 5065109 |
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| End bp | 5066029 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637886378 |
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| Product | peptidase U32 |
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| Protein accession | YP_488069 |
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| Protein GI | 86751573 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACTCA CGCTCGGACC GGTGCTCTAC AACTGGAAGC CGGAGGCATG GCGCGACTTC
TATTTCCGCA TCGCCGATGA AGCGCCGGTC GACGTCGTGA TCGTCGGCGA GGTGGTGTGC
TCGAAGCGAT CGCCGTTCCT CGAGCCGCAC ATCCCGGCGG TGGTCGAACG GCTGTCGAAT
GCCGGCAAGA CCGTGCTGAT GGGCTCGCTG ACGCTGATGT CGCTGCCGCG CGAGCGCAAG
GCGATGCTCG AGCTCGCCGG CGACGATCAG TTCACCATGG AAGTCAACGA TCTCACCTGT
CTGGGGATGC TCGGCGGCAA GCCGCATGCG ATCGGCCCGT TCGTCAACAT CTACAACGAG
GCCACCGCGA AGTATTTTGC CTCGCGCGGC GCGACCAGAA TTTGTCTGCC GCCGGAATTG
CCGCTGTCGG CGATCCGCGC GATCGCGCGC TCGCTGCCCG AGGTGACGTT CGAGGTGTTC
GCGTTCGGCC GGGTGCCGCT GGCGATCTCG GCCCGCTGCT ATCACGCCCG GCTCAACAAG
CTGTCGAAGG ACAATTGCCG ATTCGTCTGC GAGCAGGATC CCGACGGCCT CGCGGTGACG
ACGCTCGACG ACGAGCCGTT TCTGGCGATG AACGGCGTGC AGACGCTGTC CTACACCTGC
GCCAGCCTGC TCGGCGACAT CGACAAACTC CGCGACGCCG GCGCCGGCAG CCTGCGGCTG
TCGCCGCAGC AATGCGACAT GGTTGCGGTG GCGCAGCTGT TCCGCGACGT CATCGACGGC
AAGCTGGCGG CGAGCGACAG TGCGGCGAAG CTGTCGGCGA TCTATCCGCT GCAACAGTCC
AACGGCTTCC TGTTCTCCAA GCCGGGCGCA GCGTTCATCA CAGACTCGGG CGACGTGCGG
CGGATCGTGC CGGCGGCGTG A
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| Protein sequence | MQLTLGPVLY NWKPEAWRDF YFRIADEAPV DVVIVGEVVC SKRSPFLEPH IPAVVERLSN
AGKTVLMGSL TLMSLPRERK AMLELAGDDQ FTMEVNDLTC LGMLGGKPHA IGPFVNIYNE
ATAKYFASRG ATRICLPPEL PLSAIRAIAR SLPEVTFEVF AFGRVPLAIS ARCYHARLNK
LSKDNCRFVC EQDPDGLAVT TLDDEPFLAM NGVQTLSYTC ASLLGDIDKL RDAGAGSLRL
SPQQCDMVAV AQLFRDVIDG KLAASDSAAK LSAIYPLQQS NGFLFSKPGA AFITDSGDVR
RIVPAA
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