Gene RPB_4404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4404 
Symbol 
ID3912219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4991515 
End bp4991817 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content62% 
IMG OID637886309 
Producthypothetical protein 
Protein accessionYP_488001 
Protein GI86751505 
COG category[S] Function unknown 
COG ID[COG3553] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.23521 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTGC AGTCGGACGA CATCACGCAC ACCAGCCGCG GGACCGTGAA CACGGCGCAT 
GCGAGCCGAT ACTTGCAGCA GCTCTGCAAG CATTGGTCGC ATAAATTCGA AACCGAGTTC
GATTCCGTCC GGGGCCGGAT CGCGCTTCCC CTCGGGGAGA CGCGGCTGAC GGCCGAACCG
GAAAGCCTGG TGATCGATCT TACGGCCGCA GACGCCACGG GTCTCGCGAC CCTGCAGAAG
GTCGTGGTCG ACCATATCGA GCGCTTCGCG TTTCGCGAGA CGCTCCACTT CGACTGGAAG
TGA
 
Protein sequence
MNLQSDDITH TSRGTVNTAH ASRYLQQLCK HWSHKFETEF DSVRGRIALP LGETRLTAEP 
ESLVIDLTAA DATGLATLQK VVVDHIERFA FRETLHFDWK