Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_4326 |
Symbol | |
ID | 3912139 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 4908470 |
End bp | 4910380 |
Gene Length | 1911 bp |
Protein Length | 636 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637886230 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_487924 |
Protein GI | 86751428 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.471144 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATATCC AGGACAAGAG CCGTTATCGC GAGGTTCATG CCCGCTCGCT GGCCGACCCC GAGGGCTTCT GGGCCGAGGC CGCGCGCGAG ATCGACTGGA TCGTGCCGGC CACCAAAGTG TTCGATCCCT CGCAAGGCCT GTACGGCCGC TGGTTCGCCG GCGCCAAGGT CAACACCTGC TACAACGCGC TCGACCGCCA CGTCGCCAAC GGCCGCGCCG ACCAGGTGGC GCTGATCCAC GATTCGCCGC TGACCGGCAC GATCAGCACC TTCACCTATG CGGAGATGCT GCGCGAAGTG CAGGCGCTCG CCGCGGTGAT GCAGGATTTC GGCGTGGAGA AGGGCGACCG CGTCATTCTC TACATGCCGA TGGTGCCGGA ATCGATGGTG GCGATGCTGG CCTGCGCCCG CATCGGCGCG GTGCATTCGG TGGTGTTCGG CGGCTTCGCG GCGAAAGAAC TCGCCACCCG GATCGACGAC GCCAAGCCGA AGCTGATTCT CTCCGCGAGC TGCGGCATCG AGCCCGGCCG CATCGTCAAG TACAAGCCGC TGCTCGACGA GGCGATCGGC CTGTCCTCCG CCAAGCCCGA CGCCTGCATC ATCCTGAAGC GGCCGCAGCA GGATTGCGAC CTGGTCGAAG GCCGCGATCA CGATTGGGGC AAGCTGCGCT CCGAGGCGCT CGCCGCCGGC AAGACGGCCG AATGCGTCGC GGTCGACGCC ACCGATCCGC TCTACATCCT CTACACCTCG GGCACCACCG GCAAGCCGAA GGGCGTAGTG CGGGACAATG GCGGCCATCT GGTCGCGCTG AAATGGTCGA TGGAGAATCT CTACGGCGTC AAGCCCGGCG AGGTGTGGTG GTGCGCCTCC GACATCGGCT GGGTGGTCGG CCACAGCTAC ATCATCTACG GCCCGCTGAT CCATGGCGCG ACCTCGATCA TGTATGAAGG CAAGCCGGTC GGCACGCCGG ACCCCGGCGC GTTCTGGCGG GTGATCGCCG AGCACGGCGC TGTGGCGCTG TTCACGGCGC CGACGGCGTT TCGAGCGATC CGCAAGGACG ATCCCGACGG CAGCTTCATG CGCAAATACG ATCTGTCGAA ACTGCGCACG CTGTTCCTGG CCGGCGAGCG CGCCGATCCG CCGACGGTGG AATGGGCCGA GCAGCAATTG AAGGTGCCGG TGATCGATCA CTGGTGGCAG ACCGAAACCG GCTGGTGCAT CGCCGGCAAT CCGGTCGGAT TGGGTCTGTT GCCGGTCAAG CACGGCTCGC CGACGGTGCC GATGCCGGGT TACGACGTCC GGGTGGTGGA CGAGGGCAGC AAGCCGGTGC CCGCCGGCAC CATGGGCTCG ATCGTGATCA AGCTGCCGCT GCCGCCCGGC AACCTGCCGA CGCTGTGGCA GCAGGACGAG CGCTGCCGCG AGAGCTACTT CGCCGACTTT CCCGGTTACT ACAAGACCTC CGACGCCGGC TACATGGACG AAGACGGCTA CGTCTTCGTG ATGGGCCGCA CCGACGACAT CATCAACGTC GCCGGCCATC GGCTCTCGAC CGGCGGCATG GAGGAGATTC TCGCCTCGCA TCCGGACGTC GCCGAATGCG CCGTGCTCGG CATCAACGAC ACCATCAAGG GTGAAGTGCC CTGCGGTCTC ATCGTGCTGA AGAGCGGCGT CACCCGCGAT CACGCCGAGA TCGAGAAGGA GATCGTCAAG CTGGTGCGCG ACAAGCTCGG CCCGGTCGCC GCCTTCAAGC TGGCGATCAC CGTGCCGCGG CTGCCCAAGA CCCGCTCCGG CAAGATCCTG CGCGGCACCA TCAAGAAGAT CGCCGACGGC GACGAATGGG CGATGCCGGC CACGATCGAG GACCCGACCG CGCTCGACGA CATCTCCTCG GCGCTGAAGA GCCATAGCTG A
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Protein sequence | MNIQDKSRYR EVHARSLADP EGFWAEAARE IDWIVPATKV FDPSQGLYGR WFAGAKVNTC YNALDRHVAN GRADQVALIH DSPLTGTIST FTYAEMLREV QALAAVMQDF GVEKGDRVIL YMPMVPESMV AMLACARIGA VHSVVFGGFA AKELATRIDD AKPKLILSAS CGIEPGRIVK YKPLLDEAIG LSSAKPDACI ILKRPQQDCD LVEGRDHDWG KLRSEALAAG KTAECVAVDA TDPLYILYTS GTTGKPKGVV RDNGGHLVAL KWSMENLYGV KPGEVWWCAS DIGWVVGHSY IIYGPLIHGA TSIMYEGKPV GTPDPGAFWR VIAEHGAVAL FTAPTAFRAI RKDDPDGSFM RKYDLSKLRT LFLAGERADP PTVEWAEQQL KVPVIDHWWQ TETGWCIAGN PVGLGLLPVK HGSPTVPMPG YDVRVVDEGS KPVPAGTMGS IVIKLPLPPG NLPTLWQQDE RCRESYFADF PGYYKTSDAG YMDEDGYVFV MGRTDDIINV AGHRLSTGGM EEILASHPDV AECAVLGIND TIKGEVPCGL IVLKSGVTRD HAEIEKEIVK LVRDKLGPVA AFKLAITVPR LPKTRSGKIL RGTIKKIADG DEWAMPATIE DPTALDDISS ALKSHS
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