Gene RPB_4315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4315 
Symbol 
ID3912128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4899054 
End bp4899824 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content62% 
IMG OID637886219 
Producthypothetical protein 
Protein accessionYP_487913 
Protein GI86751417 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.950445 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAGC CAGCAGTGAT CGTCGTAGGC GCAGACAAGG GCGGCGTGGG CAAGACCACG 
GTGTCGCGAA CCTTGCTGGA CTATTTCAGC GCCAACAACA TCCCGACCCG CGCCTTCGAC
ACCGAATCGC CGCGCGGCAC CTTGAAGCGC TTCCATCCCG GCATCACCGA GATCGTCGAC
ATGACGACGA CGGCCGACCA GATGAAGATC TTCGACACGC TCAACACCGC GACGCCGTCG
GTGACCGTGA TCGACGTCCG CGCCGGCCTG CTGTCGCCGG CGCTGGCCTC GCTCCGCGAC
ATCGGCTTCC TCGACGCCGC GCGCTCCGGC CAGATCACCT TCGCGGTGTT CCACATCCTC
GGCCCGTCGA TCGCCTCCCT GGACGAGATC GCCGAGACCG CCAATTTCAT GATCGGCGCG
AAATATTATC TGGTGAAGAA CTTCATCAAC AACACCAGCT TCTTCGAGTG GGACCAGGCG
ACCTACAATT CGTACTTCCA CCGCATCAAG GACGCCACCG AGCTGACGAT TCCGAAGCTC
AACGAAATGG CCTACGAGCA GGTCGAGGTG TCGTCGGTGC CGTTCCTGAA ATTCGTCGCC
AACAAGGGCG TCCAGGACGA ACCGGCGAAC TACTCCTTCG TGCTGCGCGG CTATGTCCGG
CACTGGCTCG CCAATGTCTG GAGCGAGTTC GACCGCATCA AGCTCACCGA CCTCGTCGGC
AAGGACAAGG GCGGCCGCAG CACCAATGTG GCGGAAGCCG GCGAGAAATA A
 
Protein sequence
MAKPAVIVVG ADKGGVGKTT VSRTLLDYFS ANNIPTRAFD TESPRGTLKR FHPGITEIVD 
MTTTADQMKI FDTLNTATPS VTVIDVRAGL LSPALASLRD IGFLDAARSG QITFAVFHIL
GPSIASLDEI AETANFMIGA KYYLVKNFIN NTSFFEWDQA TYNSYFHRIK DATELTIPKL
NEMAYEQVEV SSVPFLKFVA NKGVQDEPAN YSFVLRGYVR HWLANVWSEF DRIKLTDLVG
KDKGGRSTNV AEAGEK