Gene RPB_4313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4313 
Symbol 
ID3912126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4897004 
End bp4897555 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content64% 
IMG OID637886217 
Producthypothetical protein 
Protein accessionYP_487911 
Protein GI86751415 
COG category[S] Function unknown 
COG ID[COG1704] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.90869 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGATCC TTCTCGGCAT CATCGTCGCG ATCGCGGTGT TCGCACTGAT GACCTACAAC 
CGTCTGGTGG CGCTGCGGCA GCGCGTCGGC CAGGCCTTCG CCGACATCGA CGTGCAGCTC
AAGCAGCGGC ACGACCTCAT TCCCAATCTG ATCGAAACGG TGAAGGGCTA CGCCGCGCAT
GAGCGCGGCA CGCTCGACGA CGTCATCAAG GCGCGCAACG CCGCGATGTC GGCGCAGGGC
CCCGGCCAGG TCGCCGCCGC CGAGAACATG CTGTCCGGCG CGCTCGGCAA GCTGATCGCG
CTCAGCGAGG CCTATCCGGA CCTCAAGGCC AACGCCAATT TCCAGCAATT GCAGAGCGAG
CTCAGCGACA TCGAGAACAA GATCGCGGCC AGCCGCCGGT TCTTCAACAA CGCCGTGCAG
GAATACAACA CCGGCATCCA GCAGATGCCG GCCGCCCTGT TCGCCGCCCC GCTCGGCTTC
ACCCACAAGG ACTATTTCGA CCTCGGAGAG ACAAGGACGC AGGTCGAGCA GGTGCCGCAG
GTGAAGTTCT AA
 
Protein sequence
MWILLGIIVA IAVFALMTYN RLVALRQRVG QAFADIDVQL KQRHDLIPNL IETVKGYAAH 
ERGTLDDVIK ARNAAMSAQG PGQVAAAENM LSGALGKLIA LSEAYPDLKA NANFQQLQSE
LSDIENKIAA SRRFFNNAVQ EYNTGIQQMP AALFAAPLGF THKDYFDLGE TRTQVEQVPQ
VKF