Gene RPB_4282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4282 
Symbol 
ID3912095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4866305 
End bp4867552 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content67% 
IMG OID637886187 
Producthypothetical protein 
Protein accessionYP_487881 
Protein GI86751385 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCATTG AGACGCAGCA GCCGCCCGTC CCGCAGCCCA TCGCCGACCG CATCGGCTTC 
GCGCGCCTGA CCAAGCGCGC GTTCGACGGC GAGAATTTGT TTCCGCTGTG GCAGAGCCTG
ATGAGCAAGG TCGATGACGG CACCGCGACC GCCGGCGAGC AACTCGATCT GGCGCTGATC
ACGCAATTGT TCGGCCACAA AGAGGCCGGG CTGTCGGTGC AGACCGAGAC GCTGGCGCAG
CATCAATTGT TCCGCTCGCC TTGCGCGCGC GAGACCCCGC CGATGCGGGT GCTGGCACTC
GCCGCCGACA TCGACATGGG CGGCAACACG CCGATCGAAT TTCTGCTGGA GAGCTCCGGC
ATCGAGCTGG TGACGCTGTA TGTGGTCGAC GGCGTGCCGC TGCCGGAGCC GCTGCCGGCG
CACGATCTGG CGATCGTGAT CGCCTCCGAC TCCGAGGAAT GCCGCGGCGC CCTGGCCAAG
ATCGCGGCGC GCGCGCCGAG CTGGCCGGTG CCGCTGCTCA ATCCGCCGGA TCTGATCGGC
CATCTCGACC GTGACAAGCT GTACCGGCTG ATCGGGGACA TCGACGGCCT CGACATTCCC
GCCACCGTTC CGGTCGGTCG CGACGCGCTC GTCGCGGTCG CGGTGGGCAC CGCGGCGCTC
GCCGACGTCA CCAACGGCGT CGGCTATCCG CTCATCGTCC GGCCCCGCGG CTCGCATGCC
GGCTTCGGCC TGGCGCGGAT CGAGCACACC GCCGACCTCG CCGCCTATCT GGAAGAGCGC
CCCGAGGAGG AATACTTCGT CGCGCGCTAT GTCGACTACG CCAGCGACGA CGGGCTGTTC
CGCAAATATC GACTCGTCGT GGTCGACGGC AAGCCCTATG CCTGCCACAT GGCGATCGCC
GACCGCTGGG ACATCTGGTA TCTCAACGCC GGAATGGCGC AGAGCGCCAG CAAGCGGCTG
GAAGAGGCGG CGTTCTTCCA CACCTTCGAT TTCGGCTTCG CGCGGCGGCA TCGCACCGCG
CTGGACGGCA TGATCGAACG GATCGGGCTC GATTATTTCA CCATCGACTG CGCGCAGACG
CCGGCCGGCG ACCTGCTGGT GTTCGAGATC GACAACACCG CGGTGGTCCA CAACATGGAC
AGCCCGGAGC TGTATCCCTA CAAGCCGCCC CAGATGATCA AGATCTTCGA CGCGTTCGCG
GCGATGCTGG AGCGTCGCGT GACGGCGCGT CGACAGAGCG TGGCGTGA
 
Protein sequence
MPIETQQPPV PQPIADRIGF ARLTKRAFDG ENLFPLWQSL MSKVDDGTAT AGEQLDLALI 
TQLFGHKEAG LSVQTETLAQ HQLFRSPCAR ETPPMRVLAL AADIDMGGNT PIEFLLESSG
IELVTLYVVD GVPLPEPLPA HDLAIVIASD SEECRGALAK IAARAPSWPV PLLNPPDLIG
HLDRDKLYRL IGDIDGLDIP ATVPVGRDAL VAVAVGTAAL ADVTNGVGYP LIVRPRGSHA
GFGLARIEHT ADLAAYLEER PEEEYFVARY VDYASDDGLF RKYRLVVVDG KPYACHMAIA
DRWDIWYLNA GMAQSASKRL EEAAFFHTFD FGFARRHRTA LDGMIERIGL DYFTIDCAQT
PAGDLLVFEI DNTAVVHNMD SPELYPYKPP QMIKIFDAFA AMLERRVTAR RQSVA