| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4246 |
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| Symbol | |
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| ID | 3912059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 4829175 |
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| End bp | 4830803 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637886151 |
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| Product | NHL repeat-containing protein |
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| Protein accession | YP_487845 |
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| Protein GI | 86751349 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3391] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.359028 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.663745 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGACCA AACTTGCGCT CGGCGCGAGC GCGATGGCGC TCGGACTGCT GGCCGTTTCC
GCCGCGCGCG CGGATGATTA CCACGTCACG AAATTGGTGC AGGGCTCGGC GTTTCACGGC
GTGCATGGCC TCGGCATCGA CAAGGCCGGC CGGCTGTTCG CCGGCTCGGT CGCGGGCGCA
GCGCTCTACG AGGTCGATCG CGACAAGGGC ACGGCGAAGA TCGCGGTGCC GACGCCGGAA
GGCATGGCCG ACGACATCGC GTTCGCGCCC GACGGCACCA TGGCGTGGAC CGCGTTCCTC
ACCGGCGACC TCTATGCGCG CAAGGGCGAC GGCCCGATCA AAAAGCTCGC CTCGGGTCTG
CCCGGCATCA ACTCGCTCGC CTTCCGCAAG GACGGCCGGC TGTACGCCAC GCAGGTGTTT
CTCGGCGACG CGCTGTACGA GATCGACGTC GCGGGCGAAA AGCCGCCGCG CAAGATCATG
GAGAAGATCG GCGGGCTGAA CGGCTTCGAA TTCGGTCCCG ACGACAAGCT CTACGGCCCA
TTGTGGTTCA AGGGCCAGGT CGCCGCGGTC GATGTCGACA AGGGCGAGCT CAACGTCGTC
GCCGACGGTT TCAAGATTCC GGCGGCGGCG AATTTCGACA GCAAGGGCAA TCTCTACGTG
CTCGACACCG CGCTCGGCCA GCTCGTCCGG GTCGATATCA AGACCGGCAA GAAACAGCTC
GCGGCGCAGC TGAAGCCGTC GCTCGACAAT CTGGCGATCG ACGCGCAGGA CCGCATCTTC
GTCTCCAACA TGGCCGACAA CGGCATCCAG GAGGTCGATC CGGCGACCGG CACCGCCAGG
CAGGTGATCA TCGGCAAGCT GGCATTTCCG GGCGGCATCG GCGTGGTCTC CGACGGCGGC
AAGGACACGA TCTATGTGGC GGATGTTTTC GCCTATCGCA GCGTCGATGG CGCCACCGGC
GAGGTCCGCG AACTGGCGCG GATGCATGCC GACGGCGTCA CGCTGGAATA TCCGATGAGC
GCCACCGCCA AGGGCAACGA GGTGATGCTG TCGAGCTGGT TCACCGGCAC CGTGCAGGTG
ATAGACCGCG CGAGCGGCAA GACCATCGAG ATGCTGCACG ACTTCAAGGC GCCGTATGAT
GCGATCCGGC TGGCGAACGG CAAGCTGGTG GTCGCCGAAC TCGGGACCAA ATCGCTGGTC
GAAGTCGGCG GCGAGCACGG CAAGGACCGA AAAGCCATCG CCACCGACCT TAACGGCCCG
GTCGGCCTCG CCGCGGCGCC CGACGGCGCG GTCTACGTCA CCGAGGCGTT CGCCGGACAA
GTGACCAAGA TCGATCCGGC CACCGGCGCC AAGACCGTGG TGGCGAAGGA TCTGAAGATG
CCGGAGGGGT TGGCGCTGGC GCCGTCCGGC AAGCTCGTCG TGGCAGAAGT CGGCGCCAAA
CGCGTGGTTG AGATCGATCC TGCGACCGGC AAGGTCACCG AACTCGCCGG CAACCTCCCG
ATCGGCCTCG TCCCCGCCCC CGGCCTGCCG CCGACCAACA TGCCGACCGG AATCGGCGTC
GGCGCCAGCG GCACGATCTA CGTGTCGTCG GACATCGAGA ACGCGATCTA CAAGATCGCG
AAGAAGTAG
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| Protein sequence | MRTKLALGAS AMALGLLAVS AARADDYHVT KLVQGSAFHG VHGLGIDKAG RLFAGSVAGA
ALYEVDRDKG TAKIAVPTPE GMADDIAFAP DGTMAWTAFL TGDLYARKGD GPIKKLASGL
PGINSLAFRK DGRLYATQVF LGDALYEIDV AGEKPPRKIM EKIGGLNGFE FGPDDKLYGP
LWFKGQVAAV DVDKGELNVV ADGFKIPAAA NFDSKGNLYV LDTALGQLVR VDIKTGKKQL
AAQLKPSLDN LAIDAQDRIF VSNMADNGIQ EVDPATGTAR QVIIGKLAFP GGIGVVSDGG
KDTIYVADVF AYRSVDGATG EVRELARMHA DGVTLEYPMS ATAKGNEVML SSWFTGTVQV
IDRASGKTIE MLHDFKAPYD AIRLANGKLV VAELGTKSLV EVGGEHGKDR KAIATDLNGP
VGLAAAPDGA VYVTEAFAGQ VTKIDPATGA KTVVAKDLKM PEGLALAPSG KLVVAEVGAK
RVVEIDPATG KVTELAGNLP IGLVPAPGLP PTNMPTGIGV GASGTIYVSS DIENAIYKIA
KK
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