Gene RPB_4223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4223 
Symbol 
ID3912031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4798219 
End bp4798701 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content65% 
IMG OID637886126 
Product3-demethylubiquinone-9 3-methyltransferase 
Protein accessionYP_487825 
Protein GI86751329 
COG category[S] Function unknown 
COG ID[COG3865] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.153142 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAAGA TTACGCCGTG CCTTTGGTTC GCCAGCGAAG CCGAGGAGGC GGCGAATTTC 
TACGTTTCGC TGCTGCCCGA CTCGCGGATC GAAACCGTGC AGCGCAGCGT GGTCGATACG
CCCGGCGCCC CGGCGGGGGC GATCCTGCTG GTCGAGTTCA TCCTCGCCGG TCACCGCTAC
ATGGCGCTCA ACGGTGGCAC GCCGATGAAT TTCACCCACG CCGTGTCCTT CATGATCGAT
TGCAAAGACC AGACCGAGGT CGACCGGCTG TGGGATGCGC TGCTCGACGG CGGCGTGGCG
GATCAGTGTG GCTGGCTGCG GGATCGCTAC GGGTTGTCCT GGCAGATCGT CCCGTCGATC
CTGCCCAAGC TGTTCAACGG CCCAGACCGC GACGGCGCCC AACGGGCGAT GCAGGCGATG
ATGGAGATGG TGAAGCTCGA CGGCGACGCG CTGCAACGAG CCTACGATGG TGCGGCAGTA
TAG
 
Protein sequence
MSKITPCLWF ASEAEEAANF YVSLLPDSRI ETVQRSVVDT PGAPAGAILL VEFILAGHRY 
MALNGGTPMN FTHAVSFMID CKDQTEVDRL WDALLDGGVA DQCGWLRDRY GLSWQIVPSI
LPKLFNGPDR DGAQRAMQAM MEMVKLDGDA LQRAYDGAAV