| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4206 |
|---|
| Symbol | |
|---|
| ID | 3912014 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 4778459 |
|---|
| End bp | 4779181 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637886109 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_487808 |
|---|
| Protein GI | 86751312 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACC TGCTCACGCT CGAAGGCGTG CACACCAATA TCGGGCGCTA TCACATTCTG
CAGGGCGTCG ACTTCACGGT GCCCGAGGGC AAGACCACGA TGCTGCTCGG GCGCAACGGC
GCCGGCAAGA CGACGACGCT GCGCACCATC ATGGCGCTGT GGCCGGCCTC GAAAGGCGAG
ATCGCCTTCG CGGGCAGGCG CATCGAAGCG ATGGCGACGC CGGACATCGC CCGGCTCGGC
CTCGGCTACG TGCCCGAATC TATGGCGGTG TTCTCCGATC TCTCGGTGAA GGAGAACCTG
ATCCTTGCCG CGCGCGACGG CGAGCTCGAC GACAAGCGGC TCGACTGGAT CTTCGGCTTC
TTCCCGGCAC TGCGGAAATT CTGGCTGTCG CGCGCCGGCT CGCTGTCGGG CGGACAGAAG
CAGATGCTGT CGATCGCCCG CGCCATCGTC GAGCCGCGCA AACTCTTGTT GATCGACGAG
CCGACCAAGG GTCTGGCGCC GGCGATCATC GGATCGCTGA TCGAATGCTT CGCAGAGATC
AAGCGCTCCG GCGCCACCAT TCTTCTCGTC GAACAGAATT TTCACGTCGC GCAGCAGATC
GGCGACACGG TGCTGGTGAT GGACAACGGC ACCATCGTGC ATCGCGGCGC GATGGCCGAT
CTCGCCGCCG ACATTCCGCT GCAGGAGCGC CTGCTCGGCC TCAGCCTGGA GGCGCATCAG
TGA
|
|---|
| Protein sequence | MTDLLTLEGV HTNIGRYHIL QGVDFTVPEG KTTMLLGRNG AGKTTTLRTI MALWPASKGE
IAFAGRRIEA MATPDIARLG LGYVPESMAV FSDLSVKENL ILAARDGELD DKRLDWIFGF
FPALRKFWLS RAGSLSGGQK QMLSIARAIV EPRKLLLIDE PTKGLAPAII GSLIECFAEI
KRSGATILLV EQNFHVAQQI GDTVLVMDNG TIVHRGAMAD LAADIPLQER LLGLSLEAHQ
|
|---|
| |