Gene RPB_4195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4195 
Symbol 
ID3912003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4767943 
End bp4768431 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content67% 
IMG OID637886099 
ProductNUDIX hydrolase 
Protein accessionYP_487798 
Protein GI86751302 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.566986 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCGGCCC TGCAGACTTT GCGCGTGACT CTCGAGCCGG TGCTGCGGCG GGTGTTTCAT 
CTGTACTGGC GGTTCGCCCG CGGCATGACG CTCGGCGCCC GCGGCGTCGT GCTCGACGAG
CAGGGGCGCG TCTTTCTGAT TCAGCACTCT TACGTCGGCG GCTGGCATCT GCCGGGCGGC
GGCGTCGAGG TCGGCGAAAC CTTCCTCGAC GCGCTCCGCC GCGAACTGAT GGAGGAAGGC
CGGATTGAAC TGACCGGCGA TCCGGAGTTG CACGGGATTT TTCTCAACAG CCATGTCTCG
CCGCGCGATC ACGTCGCCGT CTATGTGGTG CGGCAGTTCC GACAGGACAG GCCGCCCGAG
CCCAATCGCG AGATCGTCGC CTCCGGCTTC TTCGACGTTG CCGAACTGCC GCCGGATACC
ACCCGCGGCA CACGGTTGCG TATTGCCGAG GTGCTGGACC GCGAACCGCG GCGCCCGACC
TGGCGATAA
 
Protein sequence
MPALQTLRVT LEPVLRRVFH LYWRFARGMT LGARGVVLDE QGRVFLIQHS YVGGWHLPGG 
GVEVGETFLD ALRRELMEEG RIELTGDPEL HGIFLNSHVS PRDHVAVYVV RQFRQDRPPE
PNREIVASGF FDVAELPPDT TRGTRLRIAE VLDREPRRPT WR