Gene RPB_4162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4162 
Symbol 
ID3911970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4734370 
End bp4734648 
Gene Length279 bp 
Protein Length92 aa 
Translation table11 
GC content68% 
IMG OID637886066 
Producthypothetical protein 
Protein accessionYP_487765 
Protein GI86751269 
COG category[S] Function unknown 
COG ID[COG2960] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.186646 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAGA CCAGCAACCG GATTTTCGAC GAGATCGGCC GTCTGATGAA CGACGCCGCC 
GGCGCGGCGC AGGGCGTCAA GCGCGAGGTC GATTCCGTGG TGCGCAGCCA GGCCGAAAAG
ATCCTGCGCG ACCTCGACAT CGTCAAGCGC GAGGAGTTCG AGGCGGTCAA GGACATGGCT
CGGCTCGCCC GCGAGGAGAA CGAAGCCCTC AAGGCGCGGA TCGCGGCGCT CGAAGCCAAG
CTCGGCGGCG GCTCCGAGCC CCCGACCGCG GTGGCGTGA
 
Protein sequence
MTQTSNRIFD EIGRLMNDAA GAAQGVKREV DSVVRSQAEK ILRDLDIVKR EEFEAVKDMA 
RLAREENEAL KARIAALEAK LGGGSEPPTA VA