| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4128 |
|---|
| Symbol | |
|---|
| ID | 3911936 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 4700527 |
|---|
| End bp | 4701594 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637886032 |
|---|
| Product | putative adenylate/guanylate cyclase |
|---|
| Protein accession | YP_487731 |
|---|
| Protein GI | 86751235 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2114] Adenylate cyclase, family 3 (some proteins contain HAMP domain) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0249941 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGTGGC GCACCGCAAA TATTCTTTTC GCAGACGTTA AGGGTTATAG CGCTCTCAAA
GATACGCAAA TGAAGGTATT TGTCGAAGTT GTGCTAAGTA ATATCGCGCG TAGGCTACAA
GAGATTCCGA TAAAATATAA GAATACTTGG GGAGATGGAA TAGTAATAAT TTGTGACAAA
ATAGAAGATG TGTGTGAGGC GGCTCTTCAT TTGAAGGATC TATTTCAGGG TTTCAATTGG
CGCCGGCATG ATTTGCCAAA ACTTGATATC AGGATTTCAA TTCATCATGG GGAGTATCTG
GAGGGGTCTG ACCCGTTCAC CGAACGTCCC ACATTTTGTG GCCGAAGTGT GGTGACGGCG
GCTCGAATCG AGCCAGTCAC TCCGCCAGGC AAAATATGGA TGACGGCTCA AGCTGCCAGT
ATGCTGAAGC AGCACATGAG CGGGGATGAC GCGCCATATT TTGCGATTGA TCACGTCGGC
GAAATTCAAC TCCCAAAGAA GTACGGAGTC ATCGAAATAG CAACGTTACG TCGAACCGCC
GAGCCACCGC TGTGCGATCA AGATCTCAAG GAGATACGGG AGGCGGAGCG TGTGCGACTT
GAACTTGGGG GTGTGGTAGA TCGGGATAGT GATATCCGAG AATTGGTGAG CAGAGACCAG
ATCAGATCGT ATGCAGTTGT CATAGGAGTT GTCGTGCATC GCGGCGAAGT TCTGCTGGTA
AAAAGGAATG ATCGAAGCGA AGGATTGGAA TGGATGTTTC CTTCGGGAAA GAAATGGCCC
AATCAAGATG AAGTTTCAGT AATTGAAAAG GAGGTAATGG AGGAGGCGGG AATCACCTGT
GGCGTGATTG CGAAAATCGC TCACGTCGAA AAGCACCCCA CTACTGGGTT CAAATGCAGC
TACTTTCATA TGGAGCCTGG GGATGATGTC GAAATCGTGA ACGGCGATCC GTTGGAAAAC
GATGATGTCC AATGGGTGCC AATTTCTGAC GGGTTAGCCA AGATTGGATC TGCCATAAAT
CCCGATGTTG CTAGATTCCT GGCAGGATTC AGGGTTGATT CCGCCTGA
|
|---|
| Protein sequence | MQWRTANILF ADVKGYSALK DTQMKVFVEV VLSNIARRLQ EIPIKYKNTW GDGIVIICDK
IEDVCEAALH LKDLFQGFNW RRHDLPKLDI RISIHHGEYL EGSDPFTERP TFCGRSVVTA
ARIEPVTPPG KIWMTAQAAS MLKQHMSGDD APYFAIDHVG EIQLPKKYGV IEIATLRRTA
EPPLCDQDLK EIREAERVRL ELGGVVDRDS DIRELVSRDQ IRSYAVVIGV VVHRGEVLLV
KRNDRSEGLE WMFPSGKKWP NQDEVSVIEK EVMEEAGITC GVIAKIAHVE KHPTTGFKCS
YFHMEPGDDV EIVNGDPLEN DDVQWVPISD GLAKIGSAIN PDVARFLAGF RVDSA
|
|---|
| |