Gene RPB_4089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4089 
Symbol 
ID3911896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4660233 
End bp4660709 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content69% 
IMG OID637885993 
Productphosphonate metabolism PhnG 
Protein accessionYP_487693 
Protein GI86751197 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3624] Uncharacterized enzyme of phosphonate metabolism 
TIGRFAM ID[TIGR03293] phosphonate C-P lyase system protein PhnG 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.220517 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0413085 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGCTA GAGTCAAGAT GACGACATCC TTCGAATCCG GTCCCCAGAC CCGGCAGGCG 
GCGATGGCCG TGCTGGTTCA TGCCGGGGCG GAGCAGATTG CGGCGCGGCT GTCGGGGTTG
GAACTGCCTG CGAACGAGAC GCTGCGCGAG CCGGAGAACG GCCTGGTGAT GGTGCGCGGC
AGGATCGGCG GCGACGGCGC GGCGTTCAAT CTCGGCGAGG CCACGGTGAC GCGGGCGGCG
GTGCGGCTCG ACAGCGGCGA ATGCGGCTTC GGCTATACGC TCGGGCGAGA CCGCGACAAG
GCGCGGCTGA TCGCGCTGTG CGACGCGCTG ATCCAGCGCC ACGATTACGC CGAGGCGATC
GAAGCCAGGG TGCTGGCGCC GCTGCGAGCC GAGCAGGCCA CGGCGCAGCA GCGCAAGGCC
GAACACACCG CTGCGACCAA GGTCGACTTT TATACTCTGG TGCGAGGCGA GGGTTGA
 
Protein sequence
MRARVKMTTS FESGPQTRQA AMAVLVHAGA EQIAARLSGL ELPANETLRE PENGLVMVRG 
RIGGDGAAFN LGEATVTRAA VRLDSGECGF GYTLGRDRDK ARLIALCDAL IQRHDYAEAI
EARVLAPLRA EQATAQQRKA EHTAATKVDF YTLVRGEG