Gene RPB_4025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4025 
Symbol 
ID3911832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4592817 
End bp4593293 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content68% 
IMG OID637885929 
Producthypothetical protein 
Protein accessionYP_487629 
Protein GI86751133 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.982015 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGGAG AGCAACCCAT CAGCTGGCTG ATGTTTTTCA CCCTGGCGGC CGGCCTCGCG 
ATCGTCGGAT TCGCATTTCT CAACTTCATC AAGTCGCGGT CCAATCGTGC CGTGGCCGCC
GACACGCTCG AAGGCAACGG TTCCGGCCGC GGAGCGGCAC CGGACGGCGC GCTACCGGAA
CTGGTGGGCA TCACCGTGTT CGCCATGATC GCGATGGCGC TGCTGGCGAC CGGGGTGAGT
GCGCGCAACG ACACCCAGAC CGCGCAGATG ACGCCGCCGG CGGCGAACGA CGCGGCCGGG
ACCACCACTG GCAGCTCATC GGGCAATACG ACCGGCATGG CGCAGCCGGA GGGGATCCAG
AACCAGCCCA AGCGCTATCA GCCGGCCAAT CCGGGCACTG ATCCGCGCAC CGCGCCGACC
GGTTCCGACG CTGGCGTCGG CAACTCGCCG GGCAACACCG GAACGCTGAC CAAGTAA
 
Protein sequence
MDGEQPISWL MFFTLAAGLA IVGFAFLNFI KSRSNRAVAA DTLEGNGSGR GAAPDGALPE 
LVGITVFAMI AMALLATGVS ARNDTQTAQM TPPAANDAAG TTTGSSSGNT TGMAQPEGIQ
NQPKRYQPAN PGTDPRTAPT GSDAGVGNSP GNTGTLTK