| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4000 |
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| Symbol | |
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| ID | 3911807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4566063 |
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| End bp | 4567664 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637885904 |
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| Product | chlorophyllide reductase subunit Y |
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| Protein accession | YP_487604 |
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| Protein GI | 86751108 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02015] chlorophyllide reductase subunit Y |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.130756 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00873228 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACGTTA TGCCCCGCTA TTCCGGTCCG ATCGGCGAAT CGATCGTCAG CGATCCTGCT
GATCTCGATG TCGCGTCGGA GTCCGACGGC GCAACGCCCG CGATCAATGC GGCGGCGACC
AAGGCCGACG GCCTCGGCTG CCACGCCGGC GCCGCCGAAA TGAAGGCGGC CGCCGAAGCC
GCGGGCAAGA GCGAGATTCT CGATCGCTAC GCCGCGGACT ATCCGAAGGG GCCGCACGAC
CAGCCGCAGA GCATGTGCCC GGCGTTCGGC TCGCTGCGCG TCGGCCTGCG GATGCGGCGC
ACCGCGACGA TCCTGTCCGG CTCGGCCTGC TGCGTCTACG GCTTGACCTT CGTGTCGCAT
TTCTACGGCG CGCGTCGCAC GGTCGGCTAC GTGCCGTTCA ATTCGGAGAC GCTGGTCACC
GGCAAGCTGT TCGAGGACAT CCGCGACGCA GTGTTCAAGC TCGCCGATCC CGAACATTAC
GACACCATCA TCATCACCAA TCTGTGCGTG CCGACCGCCT CGGGCGTGCC GCTCGATCTA
CTGCCGAACG AGATCAACGG CGTGCGCATC ATCGGCATCG ACGTGCCGGG CTTCGGCGTG
CCGACCCATG CCGAGGCCAA GGACGTGCTG GCCGGGGCGA TGCTGGAATA CGCCCGCAAG
GAAGCCGAAC AGGGCCCGGT GCAGGCGCCG CGCGGCGGTC GCAGCGAGCG CCCCACGGTG
ACGCTGCTCG GCGAGATGTT CCCGGCCGAT CCGGTTGGTA TCAACATGAT GCTGGAGCCG
CTCGGCCTCG CGGCCGGGCC GGTGGTGCCG ACCCGCGAAT GGCGCGAGCT GTATGCGGCG
CTCGACTGCC AGGTCGTCGC CGCGATCCAT CCGTTCTACA AGGCCTGCGT CCGCCAGTTC
GATCTCGCCG GCCGCAAGAC CGTCGGCTCC GCGCCGGTCG GTCATGACGG CACCGAGACC
TGGCTGGAAG CGATCGGCAC CGCCTGCAAC GTCTCGCGCG ACAAGATCGA CGCCGCCAAG
AATCGTTTTC TGCCGGCCAT CAAGGCGGCG CTCGCTGCCA AGCCGATCGA TGCGCGGATC
ACGGTGTCCG GCTATGAGGG CTCCGAGCTT CTGGTGGCGC GCCTGCTGAT CGAAAGCGGC
GCGCGCGTGC CTTATGTCGG CACCGCGGTG CCGCGCACGC CATGGTCCGA CCTCGATCGC
GAATGGCTCG AGGCCAAGGG CGTGCGGGTG CAGTACCGCG CCTCGCTGGA GCAGGACTTC
GCGGCGGTCG ACGAATTCAA GCCGGATCTG GCGATCGGCA CCACGCCCGT GGTGCAGAAG
GCCAAGACCA TGGCGATCCC GGCGCTGTAC TTCACCAATC TGATCTCGGC GCGGCCGCTG
TTCGGCGTCG CCGGTGCCGG TTCGCTGGCG CAGGTGATCA ACGCGGCGCT CGCCAACCAG
GCGCGCTTCG ACGAAATGAA AGAGTTCTTC GGCGACGTCG GGCAGGGTTA TGCGGCCGGC
GTCTGGGAAG ATACGCCGAA GGACAACCCG GCGTTCCGCG AGAAATACAG GAAGCAGATC
GAAGCCGCAG CCAAGAAGCG CAAGGCGGAG GAGATGATCT GA
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| Protein sequence | MNVMPRYSGP IGESIVSDPA DLDVASESDG ATPAINAAAT KADGLGCHAG AAEMKAAAEA
AGKSEILDRY AADYPKGPHD QPQSMCPAFG SLRVGLRMRR TATILSGSAC CVYGLTFVSH
FYGARRTVGY VPFNSETLVT GKLFEDIRDA VFKLADPEHY DTIIITNLCV PTASGVPLDL
LPNEINGVRI IGIDVPGFGV PTHAEAKDVL AGAMLEYARK EAEQGPVQAP RGGRSERPTV
TLLGEMFPAD PVGINMMLEP LGLAAGPVVP TREWRELYAA LDCQVVAAIH PFYKACVRQF
DLAGRKTVGS APVGHDGTET WLEAIGTACN VSRDKIDAAK NRFLPAIKAA LAAKPIDARI
TVSGYEGSEL LVARLLIESG ARVPYVGTAV PRTPWSDLDR EWLEAKGVRV QYRASLEQDF
AAVDEFKPDL AIGTTPVVQK AKTMAIPALY FTNLISARPL FGVAGAGSLA QVINAALANQ
ARFDEMKEFF GDVGQGYAAG VWEDTPKDNP AFREKYRKQI EAAAKKRKAE EMI
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