| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3947 |
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| Symbol | |
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| ID | 3911754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 4506580 |
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| End bp | 4507785 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637885851 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_487551 |
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| Protein GI | 86751055 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.292669 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGACG GCATCTTCAA GGGTCTCAAG GTGCTCGATT GCGCGAGCTT CATCGCCGCA
CCCGCCGCCG CCACGGTGCT GTCGGATTTC GGCGCCGACG TCATCAAGAT CGAGCCGCCG
GGCGCCGGCG ATCCCTATCG CAACCTGCCG AACCTGCCGG GCTATCCGCG CAGCGAGCAC
AACTACGCGT GGATGATCGA GAGCCGCAAC AAGCGCAGCC TCGCGCTCGA CCTCGCCAAA
CCGGAAGGCA AAGAGGTGTT GCGCAAGCTC GTCGCCGAGG CCGACGTGTT CATCACCAAT
TTCCCGCCGC AGGTGCGGGC GCGGCTCGGC ATCGCCTATG CGGATCTGGC GCCGCTCAAC
GCGCGGCTGA TCTATGCGAG CTTCACCGGC TATGGCGAGC GCGGCGAGGA GGCCAACAAG
CCGGGCTTCG ACAGCAACGC GTGGTGGGCG CGCTCCGGCA TGATGGATCT GGTCCGCGCC
GATGAAGACA CCACGCCGGC GCGCTCGGTC GCCGGGATGG GCGACCATCC CTGCGCGATG
GCGCTGTACG GCGCGATCGT CACCGCACTG TACAAGCGCG AACGCAGCGG CAAGGGCAGC
GAGGTGAAGT CCAATCTGAT GGCCAATGGC GTGTGGTCGT CGAGCGTGCT GGCGCAGGCC
AAGCTGGTCG GCGCGCAGTT CCAGCCGCGG ATGCCGCGCG AGCGCGCGCT CAACGCGGTG
GCCAATCATT ATCGCTGCCG CGACGGCCGC TGGCTGATCC TGTCGCTGCT CAACGAAGAG
AAGCAGTGGC CGACGCTGAC GCGCTGCCTC GGCCGCGAGG ACCTGACCGA CGATCCGCGC
TTCGCCACCA CGCCCGACCG CCATGCCCGC TCGGTCGAAC TGATCGCGAT CTTCGACGAG
ATCTTCGCGA CCCGCGACCT CGCCGACTGG CGCAAGGCGC TCGACGGCAG CGGGCTGGTG
TTCGGCGTCG TCGGCATCCT CGACGACATC CCGAACGATC AGCAGATGAT CGACAACGAC
GTGCTGGTGC CGTTCGAGAA CAACACCATC ATGACGATCA ACAGCCCGAT CTGGGTCGAG
GGCAGCGCCA AGACGCGGCC GCGGCTGCCG CCGGCGCTCG GCGAACACAG CGACGACGTG
CTGCGCAGCG CCGGCTACGA CGACGCCGCG ATCAGCGCGC TGCGGACATC CGGCGTGGTG
GGATAA
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| Protein sequence | MDDGIFKGLK VLDCASFIAA PAAATVLSDF GADVIKIEPP GAGDPYRNLP NLPGYPRSEH
NYAWMIESRN KRSLALDLAK PEGKEVLRKL VAEADVFITN FPPQVRARLG IAYADLAPLN
ARLIYASFTG YGERGEEANK PGFDSNAWWA RSGMMDLVRA DEDTTPARSV AGMGDHPCAM
ALYGAIVTAL YKRERSGKGS EVKSNLMANG VWSSSVLAQA KLVGAQFQPR MPRERALNAV
ANHYRCRDGR WLILSLLNEE KQWPTLTRCL GREDLTDDPR FATTPDRHAR SVELIAIFDE
IFATRDLADW RKALDGSGLV FGVVGILDDI PNDQQMIDND VLVPFENNTI MTINSPIWVE
GSAKTRPRLP PALGEHSDDV LRSAGYDDAA ISALRTSGVV G
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