| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3857 |
|---|
| Symbol | |
|---|
| ID | 3911661 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 4410658 |
|---|
| End bp | 4411155 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637885758 |
|---|
| Product | response regulator receiver domain-containing protein |
|---|
| Protein accession | YP_487461 |
|---|
| Protein GI | 86750965 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCACGC GCGAACACGA CGCAGCGCAT GCGGAGACCG TGCCCGACAA ACTACTCGGG
TTGCTGAACC TATTGGTGAT CGACGACGAT CCGACGCAGC GCATGCTGAT CGCCGGCGCT
GCCGAAAAGG CCGGGTACAG CGTGACCCAG GCGGCGTCCT GTGCCGAAGG CATCGCGCTC
GTCCGCGAGC AGAGTTTCGA TTGCATCACC CTCGATCTGA TGCTCGACGA CGGCGACGGC
GCCGACGTCA TGCGGGCGAT GGCGGACGCT CGCTACAGCG GTCCGATGAT CGTGATCAGC
GGCATGAATT CAGAGCGCCG GCGCGCTTCG CGTGCGCTCG CCCGTTCGCT CGGGATGGAT
CTGCTGCAGA GTTTCCCGAA GCCGATCGAC CTCGCGGCGC TGCGGATATC GCTGGCCAAC
CTCCGCAGCA ACGTCGCCGG CCTGCCGATC GTCCATTCCT GGGGCGAGGT GTGCGGCCCG
CGGTTCGACG ACCGCTGA
|
|---|
| Protein sequence | MATREHDAAH AETVPDKLLG LLNLLVIDDD PTQRMLIAGA AEKAGYSVTQ AASCAEGIAL
VREQSFDCIT LDLMLDDGDG ADVMRAMADA RYSGPMIVIS GMNSERRRAS RALARSLGMD
LLQSFPKPID LAALRISLAN LRSNVAGLPI VHSWGEVCGP RFDDR
|
|---|
| |