Gene RPB_3824 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3824 
Symbol 
ID3911627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4369869 
End bp4370300 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content67% 
IMG OID637885725 
Producthypothetical protein 
Protein accessionYP_487429 
Protein GI86750933 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.186733 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAAAT CGATTCTGGT GCCGATCGAT CTCGCCGACA CTGCGCTGGC GCGGAGGGCG 
ATCGAGACCG CGGCGACGCT GGCACGGACT TACGACGGCA AAGTGCGGTT GCTGCACGTG
ATCTCGATCA CTCCGGTGGT GCTGGCCGAA TATGTGCCGG CGGATTTCGA CGACCAGCAG
CGCGGCGACG CCGAAGTCGC GCTCGCCGAG GTCGCGCGCG AGTCCGGCAT CGAGCCGGAG
CGGCTCTCGA CCGCGGTGCG CCAGGGCGGC ATCTATCACG AGATCATCGA GGAAGTCGGC
GCGATCAAGG CCGACCTGAT CGTGATGAGC TCGCATCGCC CGGCGATGCG CAGCTACTTC
CTCGGCTCCA ACGCCGGCCA CGTCGTCCGC TACGCGCCGT GCTCGGTGCT GGTGGTGCGG
GACGACAAGT AG
 
Protein sequence
MFKSILVPID LADTALARRA IETAATLART YDGKVRLLHV ISITPVVLAE YVPADFDDQQ 
RGDAEVALAE VARESGIEPE RLSTAVRQGG IYHEIIEEVG AIKADLIVMS SHRPAMRSYF
LGSNAGHVVR YAPCSVLVVR DDK