| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3809 |
|---|
| Symbol | |
|---|
| ID | 3911612 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 4347207 |
|---|
| End bp | 4347866 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637885710 |
|---|
| Product | SAM binding protein |
|---|
| Protein accession | YP_487414 |
|---|
| Protein GI | 86750918 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.914048 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCCAGG AAATCGATCT GCTCGTCAAC TACCCGCGCA CCAAGCGCAA TGTCGACGAG
CGCGGCCAGA CCAAATCCGA AGAGGACCGC GCGGTCGCGC GCCAGTTCGG CAAGGAGTTC
TTCGACGGCG ACCGCCGCCA CGGCTATGGC GGCTTCAACT ACATGCCGCG ATTCTGGCAG
CCGGTGATTC CGACGTTCCA GGCGCATTTC GGCCTCGACG CGTCGTCGTC GGTGCTCGAC
GTCGGCTGCG CCAAGGGCTT CATGCTGCAC GACATGGCCG AGCTGATCCC GGGCATCACC
GTCAAGGGCG TCGACGTCTC GGCCTATGCG ATCGAACACG GCATCGACGA CATGAGGCCG
CATCTCAGCG TCGCCAGCGC GGTCGATCTG CCGTTCCCGG ACAAATCGTT CGACGTGGTG
ATCTCGATCA ACACCGTGCA CAATCTCGTC CGTGACGACT GTGCGAGGGC GCTGCGCGAG
ATCGAGCGGG TGGCGCGCCG CGGCGCCTTC ATCACGGTGG ATGCCTATCG CGACGAGGAG
GAGAGGCGTC GGATGATGGC GTGGAACCTC ACCGCGCAGA CCATCATGCA TGTCGACGAA
TGGACCGCGT TCTTCGACGA GATCGGCTAC ACCGGCGACT ACTACTGGTT CATCCCATGA
|
|---|
| Protein sequence | MGQEIDLLVN YPRTKRNVDE RGQTKSEEDR AVARQFGKEF FDGDRRHGYG GFNYMPRFWQ
PVIPTFQAHF GLDASSSVLD VGCAKGFMLH DMAELIPGIT VKGVDVSAYA IEHGIDDMRP
HLSVASAVDL PFPDKSFDVV ISINTVHNLV RDDCARALRE IERVARRGAF ITVDAYRDEE
ERRRMMAWNL TAQTIMHVDE WTAFFDEIGY TGDYYWFIP
|
|---|
| |