| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3675 |
|---|
| Symbol | |
|---|
| ID | 3911477 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 4214988 |
|---|
| End bp | 4216205 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637885577 |
|---|
| Product | VWA containing CoxE-like |
|---|
| Protein accession | YP_487281 |
|---|
| Protein GI | 86750785 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3552] Protein containing von Willebrand factor type A (vWA) domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCGTA ACCCGATGAC CGCGATGGAT CACCTCAACC CGCCGACCGG CAAGATGGCC
GACAACATCG TCGGCTTCGC CCGCGCGCTG CGCGCGGCCG GCCTGCCGGT CGGGCCGGGC
GCGGTGATCG ATGCGCTGGA GGCGTTGCAG CTCATCGACA TCGGCAACCG CGCCGATCTC
TACGCCACGC TGGAGGCGAT CTTCGTCAAG CGTCGCGAGC ACGCGCTGAT TTTCGCGCAG
GCGTTCGCAC TGTTCTTCCG CGCCGCCGAA GAATGGCAGC ACATGCTGGA TTCGATCCCG
CTGCCCGATC ACGCCAAGAA GAAGCCGCCG CCCGCCTCGC GCCGCGTGCA GGAAGCGATG
GCGCCGTCCA CCACGCGCGA TTTCCCCGCC GCCGAAGAGC AGGAAGTGCG ACTCGCGGTG
TCCGACAAGG AGATCCTGCA GAAGAAGGAC TTCGCCCAGA TGAGCGCGGC GGAGATCGCC
GAGGTGACGC GGTCGATCGC GCGGATGCGC CTGCCGCAGG CGGAATTGCG CACCCGCCGC
GTCCGCCCGG ACAAGCGCGG CCTCAAGCTC GATCTGCGCC GCACGCTGCG CGCGTCGCTC
CGCACCGGTG GCGACATCGT CGATATTCGC AAGCTCGGGC TGATCGACAA GCCGGCGCCG
ATCGTGGCGC TCCTGGATAT CTCCGGCTCG ATGAGCGAGT ACACGCGGCT GTTCCTGCAT
TTCCTCCACG CCATCACCGA CGACCGCAAG CGCGTCTCGA CCTTCCTGTT CGGCACGCGG
CTGACCAACG TCACCCGCGC GCTGCGGGCG CGCGATCCGG ATGAGGCGCT GGCGAGCTGC
ACCTCGTCGG TCGAGGACTG GGCCGGCGGG ACGCGGATCG CGACCTCGCT GCACGGCTTC
AACAAGCTGT GGGCGCGCCG CGTGCTCGGG CAGGGCGCGA TCGTGCTGCT GATTTCGGAC
GGGCTCGAGC GCGAGGCGGA CTCCAAGCTG GCGTTCGAGA TGGACCGGTT GCATCGCTCC
TGCCGGCGGC TGATCTGGCT CAATCCTCTG CTGCGGTTCG GCGGCTTCGA ACCGCGCGCG
CAGGGCATTA AAATGATGCT GCCGCACGTT GACGAATTCC GCCCGGTGCA TAACTTGACC
TCGATGCAGG GGCTGATCGA GGCGCTGTCG TCGGCGCCGC CGCCGCACCA TTTCAGCGCG
ATCCGCTCCG CCGCCTGA
|
|---|
| Protein sequence | MQRNPMTAMD HLNPPTGKMA DNIVGFARAL RAAGLPVGPG AVIDALEALQ LIDIGNRADL
YATLEAIFVK RREHALIFAQ AFALFFRAAE EWQHMLDSIP LPDHAKKKPP PASRRVQEAM
APSTTRDFPA AEEQEVRLAV SDKEILQKKD FAQMSAAEIA EVTRSIARMR LPQAELRTRR
VRPDKRGLKL DLRRTLRASL RTGGDIVDIR KLGLIDKPAP IVALLDISGS MSEYTRLFLH
FLHAITDDRK RVSTFLFGTR LTNVTRALRA RDPDEALASC TSSVEDWAGG TRIATSLHGF
NKLWARRVLG QGAIVLLISD GLEREADSKL AFEMDRLHRS CRRLIWLNPL LRFGGFEPRA
QGIKMMLPHV DEFRPVHNLT SMQGLIEALS SAPPPHHFSA IRSAA
|
|---|
| |