| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3538 |
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| Symbol | |
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| ID | 3911340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 4049217 |
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| End bp | 4051427 |
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| Gene Length | 2211 bp |
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| Protein Length | 736 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637885440 |
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| Product | methylmalonyl-CoA mutase |
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| Protein accession | YP_487144 |
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| Protein GI | 86750648 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.162308 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.256268 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCCCA ACAGCGGCCG TGCTAAAATG AGCCGCGCAG AGATTGAGCC AATGAGCAAG
ATTCCGAACT TCGCCGAGAT CGCGTTCCAG CCCACCGCCG CCCCTGCGCC CGCAGGCGAG
GCCAAGCCGT GGCTGACGCC GGAAGGCATC CTGGTCAAGC CGGGCTACAG CGAAGCCGAT
CTCGACGGCA TCGACTTCCT CGATACATAT CCCGGCATCG CGCCGTTCCT GCGCGGCCCC
TACCCCACGA TGTACGTCAA CCAGCCGTGG ACGATCCGGC AATATGCCGG CTTCTCGACC
GCGGAGGATT CCAACGCATT TTATCGCCGC AATCTGGCCG CCGGCCAGAA GGGCCTGTCG
GTGGCGTTCG ACCTCGCCAC CCATCGCGGC TACGACTCTG ATCATCCGCG CGTCGCCGGC
GACGTCGGCA TGGCGGGCGT GGCGATCGAC AGCATCTACG ACATGCGCAC GCTGTTCGCC
GGCATCCCGC TCGACCAGAT GAGCGTGTCG ATGACCATGA ACGGCGCGGT GCTGCCGATC
CTCGCTCTGT TCGTCGCCGC CGCCGAAGAA CAGGGCGTGC CGCCGGAGAA GCTGTCGGGC
ACCATTCAGA ACGACATTCT GAAAGAGTTC ATGGTGCGCA ACACCTACAT CTATCCGCCG
ACGCCGTCGA TGCGGGTGAT TTCCGACATC TTCGCCTACA CCTCGCAGAA GATGCCGAAG
TACAACTCGA TCTCGATCTC CGGCTATCAC ATGCAGGAAG CCGGCGCGAC GCAGGACCTC
GAGCTCGCTT ATACGCTGGC CGATGGCGTC GAATATCTCC GCGCCGGCAT CGCCGCCGGC
CTCGACGTCG ACCGCTTCGC ACCGCGGCTG TCGTTCTTCT GGGCGATCGG CATGAACTTC
TTCATGGAAG TCGCCAAGAT GCGCGCCGCC CGGCTGCTGT GGGCCAAGCT GCTGACGCAG
TTCAATCCGA AGGACCCGAA GTCGCTCAGC CTGCGCACGC ATTGCCAGAC CTCCGGCTGG
TCGCTGACCG CGCAGGATGT CTACAACAAC GTGATGCGCA CCACGATCGA GGCGATGGCG
GCGACCCAGG GTCATACGCA ATCGCTGCAC ACCAATGCGC TCGACGAGGC GCTGGCGCTG
CCGACCGACT TCTCCGCGCG GATCGCGCGC AACACGCAAT TGTTCCTGCA ACAAGAGACC
GGCACCACCC GGATCATCGA TCCGTGGGGC GGCTCGTACT ACGTCGAACG CCTGACCCAC
GATCTCGCCG TCAAGGCGTG GGGCCATATC CAGGAGGTCG AGGCACTCGG CGGCATGGCC
AAGGCGATCG AAGCCGGCGT GCCGAAACTG CGCATCGAGG AAGCCTCGGC CAAGACCCAG
GCGCGGATCG ACACCGGCCG GCAATCGGTG ATCGGCGTCA ACAAATACAA ACCGACCGAC
GAAGCGCCGC TCGACGTGCT CAAGGTCGAG AATTCGACCG TGCGGCGGCT GCAGATCGAC
AAGCTGAAGC GGCTGCGTGG CGACCGCAGC CAGGCCGACG TCGACGCAGC GCTCGCGGCG
CTGACGCGCT CGGCTGCGGA CGGCAACGGC AATCTGCTGG CGCTGGCGAT CGACGCGGCG
CGGGCCAAGG CCACCGTCGG CGAAATCTCC GACGCGCTGG AGAAGGTCTA TGGCCGGCAT
CGCGCCGAGA TCCGGTCGAT CACCGGCGTC TACAAGCGGG AGGTCGCGAG CATGGCGAAC
CGGATGGAGA AGGTGCAGGC GCTGATCGAC GCGTTCGAGG ACGCCGAGGG CCGCCGCCCG
CGCATTCTCG TCGCCAAGAT CGGCCAGGAC GGCCACGATC GCGGCCAGAA GGTGATCGCC
TCGGCGTTCG CCGACATCGG CTTCGACGTC GATATCGGGC CCTTGTTCGC AACCGCCGAT
GAGGCTGCAC GGCAGGCGGT CGAGAACGAC GTCCACATTC TCGGCGTGTC GTCGCTCGCC
GCCGCCCACC TCACCGCGGT GCCGGAGCTG AAGGCGGCGC TGAAGAAGCA GGGTCGCGAG
GACATCATGA TCATCATCGG CGGCGTGGTG CCGCCGCAGG ACTACGACGC GCTGATCAAA
TCCGGCGCCG AGGCGATCTT CCCGCCCGGC ACGGTGATCG CCGACGCCGC CGAGGAACTG
ATCCACAAGC TCAACGCAAG GCTCGGGCAT TCGAGCCAGG CGGCGGAGTA G
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| Protein sequence | MTPNSGRAKM SRAEIEPMSK IPNFAEIAFQ PTAAPAPAGE AKPWLTPEGI LVKPGYSEAD
LDGIDFLDTY PGIAPFLRGP YPTMYVNQPW TIRQYAGFST AEDSNAFYRR NLAAGQKGLS
VAFDLATHRG YDSDHPRVAG DVGMAGVAID SIYDMRTLFA GIPLDQMSVS MTMNGAVLPI
LALFVAAAEE QGVPPEKLSG TIQNDILKEF MVRNTYIYPP TPSMRVISDI FAYTSQKMPK
YNSISISGYH MQEAGATQDL ELAYTLADGV EYLRAGIAAG LDVDRFAPRL SFFWAIGMNF
FMEVAKMRAA RLLWAKLLTQ FNPKDPKSLS LRTHCQTSGW SLTAQDVYNN VMRTTIEAMA
ATQGHTQSLH TNALDEALAL PTDFSARIAR NTQLFLQQET GTTRIIDPWG GSYYVERLTH
DLAVKAWGHI QEVEALGGMA KAIEAGVPKL RIEEASAKTQ ARIDTGRQSV IGVNKYKPTD
EAPLDVLKVE NSTVRRLQID KLKRLRGDRS QADVDAALAA LTRSAADGNG NLLALAIDAA
RAKATVGEIS DALEKVYGRH RAEIRSITGV YKREVASMAN RMEKVQALID AFEDAEGRRP
RILVAKIGQD GHDRGQKVIA SAFADIGFDV DIGPLFATAD EAARQAVEND VHILGVSSLA
AAHLTAVPEL KAALKKQGRE DIMIIIGGVV PPQDYDALIK SGAEAIFPPG TVIADAAEEL
IHKLNARLGH SSQAAE
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