Gene RPB_3512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3512 
Symbol 
ID3911314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4020517 
End bp4021488 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content73% 
IMG OID637885414 
Producthypothetical protein 
Protein accessionYP_487118 
Protein GI86750622 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0652436 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.207811 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAGC AGCCCCCCTT TCCCGGTTTC GACGGCCTGA TGGCGCTCTC GCATCGCGAG 
GGCGTCGACA TCCGTCCGAC GCTGCTGCGG GTGCTGACTG ACCTGTATGT GCAAAGCGCC
TCGCACACCC GCGAAGAGGA GCAGCAGTTC GTCGAACTCA CCTCGCGACT GATCGACGAG
GTCGACGACG CGACCCGCGC GGCGGTGCGC GCGCGGCTGT CGATCTATCC GCACACGCCG
CCGGCGATCG CGATGCGGCT GTCGTTGCGC ACGTCGAGCG AACAGCGCGT GCCGCAGGCC
GAAACCATCG CGCCCGCGGG GGCCGAGCCC CCGACCCGGC CGCAGCGGCC GCCGACCGAG
GCCGAGCAGC GCGCGTCGAG CCTGCCGATG CAGCCCGACG ATGCCGCCCA GCTCGACCAG
ATGTTCTTCG CCGCGGCCAC GCGCGAGCGC GCGCTGATCC TGCACAATCT CGCCGACGCG
CCGTTGCGCC CGGCGGCGCG CGTCGCACCG CACCGCGCCG CGCGCGCGAT CGCGACGCTG
CACATGGCGG CCTATGCGGC GGATGTCGAG AACTTCACCC GTGAACTCGG CGACGCGCTG
ATCCTGTCGA CCGGCGCCGC CGAGCGCGTG GTGTCGGACC AGGGCGGCGA AGCGCTGGCC
TGCGCGATGA AGGCGCTGGG CATGCCCGGG CCGGTGTTCG AGCAGGTGCT GATGTTTCTC
GATCCCGAGC TCGGCGCCTC GGTCGACCGC GTCTACCGGC TGTCGCGGCT GTACGATCGG
CTCGAGGAGC GCACCGCGCT GATCATGCTG GCGGCATGGC GCGGCGCCAC CGTGGCGACG
ACGCGGGCGA AATATCGCGC CGCGCTGTAC GACGACGAAC GCCATCGCGC CCGCGCCGCG
ACGCCACACA GCGGCCGCCC CGCGGTGCAG CCCGGCTCCG CGCTGCCGTC GCGCACCGGC
ACCGATCGCT AG
 
Protein sequence
MTQQPPFPGF DGLMALSHRE GVDIRPTLLR VLTDLYVQSA SHTREEEQQF VELTSRLIDE 
VDDATRAAVR ARLSIYPHTP PAIAMRLSLR TSSEQRVPQA ETIAPAGAEP PTRPQRPPTE
AEQRASSLPM QPDDAAQLDQ MFFAAATRER ALILHNLADA PLRPAARVAP HRAARAIATL
HMAAYAADVE NFTRELGDAL ILSTGAAERV VSDQGGEALA CAMKALGMPG PVFEQVLMFL
DPELGASVDR VYRLSRLYDR LEERTALIML AAWRGATVAT TRAKYRAALY DDERHRARAA
TPHSGRPAVQ PGSALPSRTG TDR