| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3511 |
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| Symbol | |
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| ID | 3911313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 4019329 |
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| End bp | 4020369 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637885413 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_487117 |
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| Protein GI | 86750621 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.269417 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.212557 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTAGAG TTGCAATGTT GACGGCCGGG TGCAGCGCCC TGGCGGTTCT GGTCGGCCTC
GGCGCCGGCC GCGCTTATTT CTCCGCGCCC AGCGCCCCGG CGACGGCCGC GGCCTCCACC
GAACTCACCA CCGGCGCGAT CGCGTCGCGC TGGCCGGCGC CGACCGCCGA AACCTCCAAA
GCGCCGGCGC CGAAGGTCGA GCCGGTCGTC GCCCGCGAGC CCGCGGCAGC GCCGGCCCCC
GCGCCCGCCC CGGCCCCGAT GCAGCAGGCC TGCCGCAATC CCAACGCGCT CGGCATCTCG
CGCACCGTCG AGATCGACAC CACCGGCGGC CCGGGCCTCG GCATGTCGCA ATATCGCGAC
TACGACTTTC TGCAGCCCGG CGAAGTCGCC CTGACCTTCG ACGACGGCCC GTGGCCGGTG
AACACGCCCG CCGTGCTCGC CGCGCTGGCG GCGGAATGCG TCAAGGCGGT GTTCTTCCCG
ATCGGCAAAC ATGCGAGCTG GCATCCGGCG ATCCTCAAGC AGGTGATCGC CGCCGGCCAC
ACCGTCGGCT CGCACACCTG GTCGCACGTC AATCTCGCCG GCAAGCCGTT CGCCGAGGCC
AAGACCGAGA TCGAGAAAGG CATCAGCGGC GTGGCGCTCG CCGCCGGTCA GCCGATCTCG
CCGTTCTTCC GCTTCCCGCA GCTCCGGCAG ACCGCGGACC TCAAGGCGTA TCTCGGCGAG
CGCAACGTCG CGGCGTTCTC GATCGACGTC GACAGCGAGG ATTTCCGCAT TCACAAGCCG
GACCAACTGA TCGCCGGCAC GATGGCCAAG CTGAAGAAGA CCGGCAAGGG CATCCTGTTG
ATGCACGATT TCCAGAAGAG CACCGCCGAA GCGCTGCCGG AATTGCTGTC GCAGCTCAAG
GCCGGCGGCT ACAGGATCGT GTTCATCACC GCCAAGGACA AGATCGCGAC GCTGCCGGAA
TACGACGCGC AGGTCGCCCC GGCGCAGCCG ACCGCGAGCA ATGCGCGGCC GATCGCCAGC
GTGATCCGCA CCGTCAAGTA A
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| Protein sequence | MRRVAMLTAG CSALAVLVGL GAGRAYFSAP SAPATAAAST ELTTGAIASR WPAPTAETSK
APAPKVEPVV AREPAAAPAP APAPAPMQQA CRNPNALGIS RTVEIDTTGG PGLGMSQYRD
YDFLQPGEVA LTFDDGPWPV NTPAVLAALA AECVKAVFFP IGKHASWHPA ILKQVIAAGH
TVGSHTWSHV NLAGKPFAEA KTEIEKGISG VALAAGQPIS PFFRFPQLRQ TADLKAYLGE
RNVAAFSIDV DSEDFRIHKP DQLIAGTMAK LKKTGKGILL MHDFQKSTAE ALPELLSQLK
AGGYRIVFIT AKDKIATLPE YDAQVAPAQP TASNARPIAS VIRTVK
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