Gene RPB_3440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3440 
Symbol 
ID3911242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3943283 
End bp3946249 
Gene Length2967 bp 
Protein Length988 aa 
Translation table11 
GC content69% 
IMG OID637885343 
Productbifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase 
Protein accessionYP_487047 
Protein GI86750551 
COG category[O] Posttranslational modification, protein turnover, chaperones
[T] Signal transduction mechanisms 
COG ID[COG1391] Glutamine synthetase adenylyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.520311 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0130451 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCCT CCGCGATTGA CGCGGACATT TCACCCGCCT CACTAGCCGC GCGTTTCGCC 
GCCGGGCCGC AATTGCATGC GCCCGACGAG GCGGAAAAGC GCTGCGCCGA CTGGCTCGCC
GACGTCCCGG CCGAGCTGGC TGCTCCGATC CGCGCCGTCG CCGATCGCTG CCCGAACCTC
CGCATCGCGC TGCAATCGAT CGCCGAGGCC TCGCCCTATC TGTTCGACCT GATCCGCGCC
GATCCGGCGC GGCTGCTGCG GCTGCTGCGG TCCGAGCCGG AGACCGGCTT TCGGGCGCTG
CTCGACGCCA CCGCGGCTGC GGTCGCCACC GCCTCCGACG AGGCCGAGGT GATGGCGGTG
CTGCGCCGGA TGAAGGCGGA GGCGGCGCTG TCGATCGCGC TGTGCGACAT CGGCGGGCTG
TGGCCGGTGC TGCAGGTGAC GCAGGCGCTG ACCGACCTCG CGGTGCAATC GGTGCAGATG
ACGCTGCGCT TCCTGCTGCG GCAGGAGGCG GCGCGCGGTC GCATCCATCC GCCGAACCCC
GACGCGCCGG AAGAGCGCAG CGGCCTGATC GTGTTGGCGA TGGGCAAGAT GGGCGCCGGC
GAGCTGAACT ACTCCAGCGA CATCGACCTG ATCGTGTTCT ACGAGCTCGA CGCGCCGACG
CTCGCGCCCG ACATCGAGCC GCAGCCGTTC TTCGTGCGGG TGACGCAGGG CCTGAGCCGC
ATCCTGCAGC AGCGCCGCCA CGACGGCTAC GTGTTCCGCG TCGATCTGCG GCTGCGCCCC
GACCCGGCGT CGACGCCGGT GGCGCTGTCG ACCGCGTCGG CGCTCAACTA CTACGAGCGC
GAGGGCCGCA CCTGGGAGCG CGCCGCGATG ATCAAGGCGC GCGCCTGCGC CGGCGATGTG
GTCGCGGGCG AGGCGCTGCT GTCCGAGATC GCGCCGTTCG TCTGGCGCAA GCATCTCGAT
TTCGCCGCGC TCTCCGACGT CCACGACATG AAGCGACAGA TGCAGACGTT CCGCGGCCAG
ACCGAGGTCG CGGTCGAGGG CCACAACGTC AAGGTCGGCC GCGGCGGCAT TCGCGAGATC
GAGTTCTTCG CGCAGACCCA GCAATTGATC GCCGGCGGCC GGCATCCGGA GCTGCGGGTG
CGGCCGACGC TCGCCGCGCT CGACATTCTG GCGAACCGCG ACTGGATCAC GTTCCAGGCG
CGCGACGAAT TGTCCGCTGC CTATCAGTTC CTGCGCCGCG TCGAGCATCG CATCCAGATG
ATCGCCGACG AACAGACCCA CACGCTGCCG GACAGCATCG AGGCGGTGGA GCGGTTCTCG
CGGTTCTTCG GCTATGCCAG CCGTGAGGCT TTCGCACGCG ATCTGCTGGC GCATCTCGAT
TGCGTGCAGG GCCACTACAG CAAGCTGTTC GAAGGCGATC CGACCGGCAC CGCCAAGCTG
CCGATCGACT ACGCCGGCGG CGCCGAGGAC ACCGTGCTGC TCGATCATCT GCGCGCGCTC
GGCTACAAGA AGCCGCTGAT GGTGGCGACC ACGCTGCAGC AATGGATGGC CGGCGGCTAT
CGCATCCTCA AGGTCGAGGC GACGCAGCGC GCATTCAACG ATTTCGTGCC GGCGCTGATC
GAGGAACTGG CGCGCGCCGA GGAGCCCGAC AATGCGGTCA ACGCATTCGA CCGGCTGTTG
CAGGCGCTGC ATCGCGGCGG CCGGCTGATC TCGCTGCTCA GCCAGAACCG CGATCTGCTG
ACGCTGATCG CGCTGGTGCT CGGCGCCGCG CCGCGGCTCG GCGACATGCT GGCGCGGCAA
CCGCAGATCA TGGACGGGCT GATCGACCCG CGCTTCTTCG GCGCGATGCC CGACCGCACC
GAATTGTCGG CGCGGCTGGC GGCGACGCTT TCGGACGCCG GCTCCTATGA AGAGTTTCTC
GATCGGCTGC GATTGTTCGG GCAGGAAAGC CTGTTCCTGA TCGGCACACG AATTCTGTCC
GGCACGGTGT CGACGCAGCA GGCCAGCATC GCCTTCGCCG ACGTCGCCGA GGGCATTGTC
GGTACGGTGC ACGATCTGGT CAGCAAGCAG TTCGTGTCGC AATACGGCCG GATCAAGGAT
CAGGAGACCG CGATTCTGGC GATGGGCAAG CTCGGCAGCC GCGAGATGAC GGCGGCGTCC
GATCTCGACC TGATCCTGAT CTACGATTTC GACCACGAGC AGCCGGACTC GGACGGCGAA
CGTTCGCTGC ACGGCGCGCA GTATTTCGCG CGCTTCACCC AGCGGCTGAT CTCGGCCTTC
ACCACGCGGA CCAACTACGG CGTGTTGTAC GACGTCGACA TGCGGCTGCG GCCGTCGGGC
CGCGCCGGCC CGCTGGCGTC GCGGCTGGAT TCGTTCGCGG AGTATCAGGA GGTCGAGGCC
TGGACCTGGG AGCATCTGGC GTTGACGCGG GCGCGGGTGA TCTCGGCGTC GCCGGAGTTC
CGCGCGCGGA TCGAACAGGT GATCCGCGCG GTGCTGACGC GGCCGCGCGA CGCCGCGATC
GCCAACGACG TCGCCGAGAT GCGCGCCGCG ATCGCGCAGG AGAAGGGCGA GGGCGACGTC
TGGGACCTGA AATACGCCGC CGGCGGCATG GTCGATATCG ACTTCATCGC GCAGTATCTG
CAACTCGTGC ACGCCGCCAC GATGCCGGAC ATTCTCGCCG TCGGCACGCT GTCGGCGATC
GACAATGCGG CGCGGCTCGG CGTGCTGGCA CAGCCCGACG CCGACGTGCT GCGCCCGGCG
GCGCGATTGT ATCACGACCT CACGCAGATC CTGCGGCTGT GCGTCAGCGA CAAGTTCAAG
CCGGAGACCG CCGGCGACGA TCTGCTGCGC GTGCTGGTCC GCGCCGGCGA CGCGCCGGAT
TTCTCCTCGC TGCAAGCGCG GGTGAAGGAA ACCCAGGCCG AGGTCAGGGC GATCTTCAAC
CGGCTGATCG GTGGCAACGG CGAGTAG
 
Protein sequence
MSSSAIDADI SPASLAARFA AGPQLHAPDE AEKRCADWLA DVPAELAAPI RAVADRCPNL 
RIALQSIAEA SPYLFDLIRA DPARLLRLLR SEPETGFRAL LDATAAAVAT ASDEAEVMAV
LRRMKAEAAL SIALCDIGGL WPVLQVTQAL TDLAVQSVQM TLRFLLRQEA ARGRIHPPNP
DAPEERSGLI VLAMGKMGAG ELNYSSDIDL IVFYELDAPT LAPDIEPQPF FVRVTQGLSR
ILQQRRHDGY VFRVDLRLRP DPASTPVALS TASALNYYER EGRTWERAAM IKARACAGDV
VAGEALLSEI APFVWRKHLD FAALSDVHDM KRQMQTFRGQ TEVAVEGHNV KVGRGGIREI
EFFAQTQQLI AGGRHPELRV RPTLAALDIL ANRDWITFQA RDELSAAYQF LRRVEHRIQM
IADEQTHTLP DSIEAVERFS RFFGYASREA FARDLLAHLD CVQGHYSKLF EGDPTGTAKL
PIDYAGGAED TVLLDHLRAL GYKKPLMVAT TLQQWMAGGY RILKVEATQR AFNDFVPALI
EELARAEEPD NAVNAFDRLL QALHRGGRLI SLLSQNRDLL TLIALVLGAA PRLGDMLARQ
PQIMDGLIDP RFFGAMPDRT ELSARLAATL SDAGSYEEFL DRLRLFGQES LFLIGTRILS
GTVSTQQASI AFADVAEGIV GTVHDLVSKQ FVSQYGRIKD QETAILAMGK LGSREMTAAS
DLDLILIYDF DHEQPDSDGE RSLHGAQYFA RFTQRLISAF TTRTNYGVLY DVDMRLRPSG
RAGPLASRLD SFAEYQEVEA WTWEHLALTR ARVISASPEF RARIEQVIRA VLTRPRDAAI
ANDVAEMRAA IAQEKGEGDV WDLKYAAGGM VDIDFIAQYL QLVHAATMPD ILAVGTLSAI
DNAARLGVLA QPDADVLRPA ARLYHDLTQI LRLCVSDKFK PETAGDDLLR VLVRAGDAPD
FSSLQARVKE TQAEVRAIFN RLIGGNGE