| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3374 |
|---|
| Symbol | cysS |
|---|
| ID | 3911176 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 3857649 |
|---|
| End bp | 3859130 |
|---|
| Gene Length | 1482 bp |
|---|
| Protein Length | 493 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637885277 |
|---|
| Product | cysteinyl-tRNA synthetase |
|---|
| Protein accession | YP_486981 |
|---|
| Protein GI | 86750485 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0215] Cysteinyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00435] cysteinyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.301866 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0269367 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTTGC GCCTCTACGA CACGCTGACC AAAGAGAAGC GCGCCTTCGC GCCGATCGAT
CCGTCGAACG TGCGGATGTA TGTCTGCGGG CCGACGGTCT ACGACTTCGC CCATATCGGC
AATGCCCGGC CGGTCATCGT GTTCGACGTG CTGTTCCGGC TGCTGCGGCA TCTCTACGGC
GAAAACCACG TCACCTACGT CCGCAACATC ACCGACGTCG ACGACAAGAT CAACGACCGC
GCCGCGCGTG ACTATCCCGG CCTGCCGCTG AACGAGGCGA TCCGCAAGGT CACCGAGCAG
ACCGAGCGGC AATTCCACGA CGACGTCGAT GCGTTGGGCT GCCTGCGGCC GACCGTCGAG
CCGCGCGCGA CCGAACACAT CGGCGAGATG CGCACCATCA TCGACCGGCT GGTCGCCGGC
GGCTTCGCCT ATGTCGCCGC GGACCACGTG CTGTTCTCGC CGGCGGCGAT GAACGCTGCG
AACAGCGTGC TGCCGCGCTA CGGCGCGCTG GCCAACCGCT CGCTCGACGA GATGATCGCC
GGCGCCCGCG TCGACGTCGC CCCCTACAAG CGCGACGCCA CCGACTTCGT GCTGTGGAAG
CCGTCGAAGC CCGGCGAGCC GTCCTGGCCG TCGCCGGCCG GCATCACGAT GGAAGGACGT
CCCGGCTGGC ACATCGAATG CTCGGCGATG TCGTGGAAGC ATCTCGGCGA GACCTTCGAC
ATCCACGGCG GCGGCATCGA CCTGGTGTTT CCGCATCACG AAAACGAAGT CGCGCAAAGC
TGCTGCGCCT TCCAGACCGA CCGCATGGCC CAGACCTGGA TGCACAACGG CTTCCTACAG
GTCGAAGGCG AGAAGATGTC GAAGAGCCTG GGCAACTTCA TCACGATCAG GGAGTTGCTG
GCGACGGAGA AATTCGGGGG AGATAGTTGG GTTGGTGAGA TTCTTCGATT TGCGATGATT
AAAACTCACT ACCGCTCACC GATCGACTGG ACCGTGAAGG CGCTCGACGA GGGTCATAAG
GTTCTTTGGG ATTGGTATCG CGACATTGGT GACGTCGGGC CGGCACAGCA ACTGCCGGGA
GAATTCATCG ACTGTTTGGC TGATGATCTC AACATATCGA GTGCCATCGC ATTCATGCAC
AGCCTGCGTA AAGATAAGAA GTTTGCTGAG CTTCTTGCGA CGATGAACTT TCTTGGATTC
TCGAATGCGG AATCGGTTTT GGCGCGTCGC CCTGTTGGAG TTCGGATTAA TCTTCCCCCT
GCGCACGCCG AGGCGGCCGT CGGAACAGTG GAAGTACTCG CAAAGCCCTT GAGCAAGAGC
GAGATTGAAG AACGGATCGA CGCCCGAACC GCCGCCCGCG CGCGAAAAGA TTTCAAGGAA
TCCGATCGCA TCCGCGACGA GCTCGCCGCG ATGGGCATCG CGATCAAGGA CGGCAAGGAC
GCCGACGGCA AGCCGGTGAC GACCTGGGAG ATCGCGCGAT GA
|
|---|
| Protein sequence | MALRLYDTLT KEKRAFAPID PSNVRMYVCG PTVYDFAHIG NARPVIVFDV LFRLLRHLYG
ENHVTYVRNI TDVDDKINDR AARDYPGLPL NEAIRKVTEQ TERQFHDDVD ALGCLRPTVE
PRATEHIGEM RTIIDRLVAG GFAYVAADHV LFSPAAMNAA NSVLPRYGAL ANRSLDEMIA
GARVDVAPYK RDATDFVLWK PSKPGEPSWP SPAGITMEGR PGWHIECSAM SWKHLGETFD
IHGGGIDLVF PHHENEVAQS CCAFQTDRMA QTWMHNGFLQ VEGEKMSKSL GNFITIRELL
ATEKFGGDSW VGEILRFAMI KTHYRSPIDW TVKALDEGHK VLWDWYRDIG DVGPAQQLPG
EFIDCLADDL NISSAIAFMH SLRKDKKFAE LLATMNFLGF SNAESVLARR PVGVRINLPP
AHAEAAVGTV EVLAKPLSKS EIEERIDART AARARKDFKE SDRIRDELAA MGIAIKDGKD
ADGKPVTTWE IAR
|
|---|
| |