Gene RPB_3363 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3363 
Symbol 
ID3911165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3845788 
End bp3846609 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content65% 
IMG OID637885266 
ProductOmpA/MotB 
Protein accessionYP_486970 
Protein GI86750474 
COG category[N] Cell motility 
COG ID[COG1360] Flagellar motor protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0104995 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAGA AGAAGCGGGA GGAGGCACAC GGCGGTCACG GCTGGTTCGT GACCTTCGCC 
GATCTGATGG CGCTGCTGCT GGCGTTCTTC GTGATGCTGA CCGCGTTCTC GACTCAGGAC
AAGGACAAGC TGAAGGTCGT CGCGGGCTCG ATGCGCGAAG CGTTCGGCGT CCAGTCCGAC
GCCCGCTATT CCGGCATCAT CGAAAATGAC GGCCTGCCGA CCCGTGGCAA GGTCAAGAAC
ACCGAACACG TCAATCCCGA ATTGTCGACC GCCAAGCCGT CGCCCGGCGA GGTGTCTAAA
GACGAGGGCA TCCACACCAA GGAGGAGCGC GAATTCGCGC TCGCCTCGGC CTCGCTGCGA
CAGGCTCTGC AGGACATGCC GGAAATCTCC GAGCTTTCGA AGAACGTGAT GTTCGAAGAG
ACCAAGCAGG GACTCAACCT GGAGATCATG GACCAGGACG GTCGCGCGAT GTTCGCCGAC
GGCTCCAAGG CTCCGTTCGA GCGCACGCGA AGGCTGCTCC AGAGCCTCGC CGGGCCGCTG
CGCGCGACCC CGCTGCGGAT CACCATCGCC GGCCACACCT CGGCAGGGTT GATGCCGGCG
CGAAGCGACT ACAATGGCTT CGACCTGTCC GCGGACCGCG CCAATGCAGT GCGTCAGATC
CTCGAACGGG AAGGGGTTCC GACCTCGCAT TTCTTTGCGG TCACCGGCCG GTCCGATACC
CAGCCGTTGT TTCCCGAGGA CCCCGCGATC GCCGCCAACC GCCGGGTGAC CATCACGCTG
ATGCGGGAGA GCCCGGCGCT GCCGCCGGGA TTGAAGCCCT GA
 
Protein sequence
MAKKKREEAH GGHGWFVTFA DLMALLLAFF VMLTAFSTQD KDKLKVVAGS MREAFGVQSD 
ARYSGIIEND GLPTRGKVKN TEHVNPELST AKPSPGEVSK DEGIHTKEER EFALASASLR
QALQDMPEIS ELSKNVMFEE TKQGLNLEIM DQDGRAMFAD GSKAPFERTR RLLQSLAGPL
RATPLRITIA GHTSAGLMPA RSDYNGFDLS ADRANAVRQI LEREGVPTSH FFAVTGRSDT
QPLFPEDPAI AANRRVTITL MRESPALPPG LKP