Gene RPB_3354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3354 
Symbol 
ID3911156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3835771 
End bp3836241 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content61% 
IMG OID637885257 
ProductBeta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ 
Protein accessionYP_486961 
Protein GI86750465 
COG category[I] Lipid transport and metabolism 
COG ID[COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.217616 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0786148 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTCG AATATTTCCA TCTGATCGAT CGGATCGCCG ACCTTCGTCT CGAGCAGCGC 
AGCATCACGG TCGAAGCGCT GGTGCCGCAG ACGAGCACCA TCTTCGAGGG TCATTTCCCC
GGCTATCCGC TGATGCCGGG CGTGTTGCTG ATCGAAACGA TGGCGCAGAC CTCCGGCTGG
CTGCTGATCG CACTGATGCA GTTCCAACGC ATGCCGTTCC TGGCGGCGGT CAAGGAAGCC
AAGATGCGCA GCTTCGTCAC GCCCGGCGAG ATGCTCTCTG TCGATGCCAC GGTGGTCCAC
GAGGGCTCAG GCTACACCAT GACCGAAGCG AACATCAGAA GCGGCGGCAA GCTGGCGTGC
AACGCGGCGC TGACCTTCCG CCATGTGCCC TTTCCGCATC CGGATCTGCG CGGGCACATG
GAGACGATGG CCAGACAGAT CGGATTTCCG GAGCAGATGA TCCATGGCTG A
 
Protein sequence
MNLEYFHLID RIADLRLEQR SITVEALVPQ TSTIFEGHFP GYPLMPGVLL IETMAQTSGW 
LLIALMQFQR MPFLAAVKEA KMRSFVTPGE MLSVDATVVH EGSGYTMTEA NIRSGGKLAC
NAALTFRHVP FPHPDLRGHM ETMARQIGFP EQMIHG