Gene RPB_3351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3351 
Symbol 
ID3911153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand- 
Start bp3834150 
End bp3834773 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content66% 
IMG OID637885254 
Producthypothetical protein 
Protein accessionYP_486958 
Protein GI86750462 
COG category[S] Function unknown 
COG ID[COG4318] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.789599 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones8 
Fosmid unclonability p-value0.0806703 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAATC CGCGCGAACC GATGCTGCAC CCGATTCCGA TCCTGTCACT GCGACCGACG 
CAGATGACCG TCGGCCTGCG CGAAGTCGAA GAAAAGCGCC GGCGCTGGCG CGCGCACAAG 
CCGAAGAAGG AAGGCCGGCG GCTCGCCGAG CACATGATCC CGGTCGTGCT CGGCCCTGGC 
AAGCGCCACT ATGTGGTCGA TCACCACCAT CTCGCCCGCG CGCTGCATGA AGAGGGCATC 
AAGGACGTCG CCGTCACGGT GATCGCCGAT CTCAGCATGG TCGATCGCGA CGCGTTCTGG 
GTCGTGCTCG ACAGCCGGCG CTGGGTCTAT CCCTACGACG CCAAGGGCGA GCGGCACCAT 
TACAAGGATC TGCCGAAAAC TGTCGCCGCG CTGAAGGACG ATCCGTTCCG CTCGCTCGCT 
GGCGAGCTGC GCCGGATCGG CGGCTACGCC AAGGACACCA CGCCCTTCAG CGAATTCCTT 
TGGGCGGATT TCCTGCGGCG CCGGCTGTCG CGCAAATCGG TCGACGCGGA TTTCGCGAAG 
GCGACGGAAC TGTCGCTGGC GCTCGCCAAG AGCAGGGATG CGATCTATCT GCCGGGCTGG 
TGCGGACCGG CGTTCGACGA TTGA
 
Protein sequence
MANPREPMLH PIPILSLRPT QMTVGLREVE EKRRRWRAHK PKKEGRRLAE HMIPVVLGPG 
KRHYVVDHHH LARALHEEGI KDVAVTVIAD LSMVDRDAFW VVLDSRRWVY PYDAKGERHH 
YKDLPKTVAA LKDDPFRSLA GELRRIGGYA KDTTPFSEFL WADFLRRRLS RKSVDADFAK 
ATELSLALAK SRDAIYLPGW CGPAFDD