| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3326 |
|---|
| Symbol | |
|---|
| ID | 3911128 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 3805517 |
|---|
| End bp | 3806152 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637885229 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_486933 |
|---|
| Protein GI | 86750437 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.321018 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAGG TTCTGTTCGC CGGCGCCACC GCTTTGGTCC TCGCCGGGAC GTCCGCCGCC
TACGCGCAGC AGCGCGGCTG GTTCGATCAT CATCCCGAGC ATCGCGCTGA TCGTTCTTGG
GCCAGCGCGG AGGACCGCGC CGCCTTCGCC GATGCGCGGA TTGCCGCGGT GAGGGCAGGG
CTGAAACTGA CGCCGGACCA GGAGAAAATG TGGCCGCCGC TGGAGACCGC GGTGAAGGAA
TTCGCCAAGC TGCGGATCGA CCGCGCCGAG GCGCGGATGA AGGCGCGCGA CGACGACCGC
GACAGCCGCG GTCCGGCCGA CCCGGTGGCG CGGCTGCGCG ACCGCGCCGA CGGCATGGCC
GCCACCGCGG CGGCGATGAA GAAGATCGCC GATGCGGCCG ACCCGCTCTA CAAGTCGCTC
GACGACGCCC AGAAGCGCAG GCTGAAGGCC CTGACCCGGT TCGAGGGCGC CCACGGCTGG
GGCATGGGTC GGCACCACCA CGAGCGATTC ATGCGCGATC GCGACGATCG TGGCCCGCGC
CGGGATCGCG ACTGGGATCG TGGTCCCGGA CCCCGTCCGG GCATGATGGA CGATCGCGAC
GACCTCGACG ACGGCCCGGG CCCGCGCCAG CTCTGA
|
|---|
| Protein sequence | MKKVLFAGAT ALVLAGTSAA YAQQRGWFDH HPEHRADRSW ASAEDRAAFA DARIAAVRAG
LKLTPDQEKM WPPLETAVKE FAKLRIDRAE ARMKARDDDR DSRGPADPVA RLRDRADGMA
ATAAAMKKIA DAADPLYKSL DDAQKRRLKA LTRFEGAHGW GMGRHHHERF MRDRDDRGPR
RDRDWDRGPG PRPGMMDDRD DLDDGPGPRQ L
|
|---|
| |