Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_3288 |
Symbol | |
ID | 3911089 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 3760332 |
End bp | 3761081 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637885190 |
Product | cobalt transport protein |
Protein accession | YP_486895 |
Protein GI | 86750399 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.972587 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCGGTG CTGTGCGACG CTGGGGCGCC TCGGCGCCGC TCGTCGCCGT TCCGGTCGGC TGGAAGCTCG CGTTGCTCGC ACTCCTGGGT GCAAGCGTCG CCTTCATCGA CAGACCGTGG ATGCTGGCGT GCGGCGTCGC TTCGGCCGCC TGCGCGTTGA TGCTGACCGG CGCCTCGCCC CGCGCGCTGT GGGCGGGGCT CAAGGGGACG ACGATCATCG TCGGATGCAT CGGACTGTTC GACTACTGGA GCCATGGTCT CGCGTCCGCC GCCGCCGTCA CCACGCGACT GATGATCCTG ATCGGATTTG CCCAGGCGGT AACGACGAGT TCGACGGTGC CGGCGATGAC GGCCGCGATC GAAACGGCGC TGCGTCCGCT GCAATGGATC GGGCTGCTCG ATGCCGAGCG GGCCGGCTTG ACGCTGACCC TGGCGATCCG GTTCGTGCCG CTGATCCTGG ACGAAATCGC CGCGATCCGT GAGGCCCAGC GGGTGCGGGG ACTGGATCGT TCGATCGTCG CGCTGGCGGT GCCGCTGGTC GTCAAGATCA TCCTGCGCGC GCAGGATCTG GCCGACGCGA TCGACCTGCG TGGTCCGCCG CCGCGTCAAG GCCGGCAGCC GGTGGCCGTG GCGGCGTCGG CCGAGAGCCG TGCGCAGCGT CGCGCAGCGC GTCGCGCGTG TGGCGCCGTG CCCTACGACG TTTCGGCTCT CGAGGTCGGG GGCGGCAAGA GAGGAGACAC TGCACCATGA
|
Protein sequence | MIGAVRRWGA SAPLVAVPVG WKLALLALLG ASVAFIDRPW MLACGVASAA CALMLTGASP RALWAGLKGT TIIVGCIGLF DYWSHGLASA AAVTTRLMIL IGFAQAVTTS STVPAMTAAI ETALRPLQWI GLLDAERAGL TLTLAIRFVP LILDEIAAIR EAQRVRGLDR SIVALAVPLV VKIILRAQDL ADAIDLRGPP PRQGRQPVAV AASAESRAQR RAARRACGAV PYDVSALEVG GGKRGDTAP
|
| |