Gene RPB_3224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3224 
Symbol 
ID3911025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3685661 
End bp3686437 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content69% 
IMG OID637885126 
Producthypothetical protein 
Protein accessionYP_486831 
Protein GI86750335 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATCG GCAGCTCGAT ATCCTATCAG TCCGATCTGA CCGCGGTGCA GCTCCTCGCG 
CGGGCCGGCG CGGCCGGCCG TGCCGCGAGC GGATCTGCAG CCCCCGGTCC GGTCGGGACC
GGCGCGGGCG GCGCTGCGGC GTCCACGCTG CTCACTTATT CGTCCGCGGG CACGCTGCCG
TCGGGGGCGA GCGCGATCGC GATGATCAAG ACGATGGCGG CTTCCGGCAC CTTCGCCAAT
GCCGCAATGG GCGTCGCCGA CGATCAGGTC CGCGCGCTGG TGCGCGACGG CAAGATCGCC
CAGCTTCCGC TGCCGAAGGA TTTTCAAACC GCGGGTCTGA GCACGGCGGA GCAGAACGTC
TACCATGTGG TGCAGACGCT GCAGAGCCTG TACGACGCCC AGCCCAAGAC GCTCGACGAC
GCTCTGGCGG GGCACGTCGC GACCGTGCTC GACTCTTATC CCGAGGCGAT CGCGCGGATG
AAGGACGGGC TGGCGAACGG CACGCTGCCG GAGTCCGACG GCTGGAACGA CGTCATCGCC
CGATACGAGG ACGAGCTGTC GGCCGCGCAG CAGGGCAAAA TGAAGATCAC CGCGATCGAC
GATCCGGGCC TGGTGCGGAC CACCAACGAA TTCAGCGTCT CGTCCAACGG CATCGGCTGG
AGCGGCCGCG GCACGTCGAC GACGGCGAAC ATCCCGGCGC TGCAAGAATT GCTCGGCACC
GGCAACGTGC TGCCCGGCGG CAGCCCGTAC ACCGGCAGCT ACGCCATCAG CTGGTAG
 
Protein sequence
MRIGSSISYQ SDLTAVQLLA RAGAAGRAAS GSAAPGPVGT GAGGAAASTL LTYSSAGTLP 
SGASAIAMIK TMAASGTFAN AAMGVADDQV RALVRDGKIA QLPLPKDFQT AGLSTAEQNV
YHVVQTLQSL YDAQPKTLDD ALAGHVATVL DSYPEAIARM KDGLANGTLP ESDGWNDVIA
RYEDELSAAQ QGKMKITAID DPGLVRTTNE FSVSSNGIGW SGRGTSTTAN IPALQELLGT
GNVLPGGSPY TGSYAISW