| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3184 |
|---|
| Symbol | |
|---|
| ID | 3910985 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 3640962 |
|---|
| End bp | 3641741 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637885086 |
|---|
| Product | precorrin-4 C11-methyltransferase |
|---|
| Protein accession | YP_486791 |
|---|
| Protein GI | 86750295 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2875] Precorrin-4 methylase |
|---|
| TIGRFAM ID | [TIGR01465] precorrin-4 C11-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGTCC ACTTCATCGG CGCCGGCCCC GGCGCGCCCG ACCTGATCAC GGTGCGCGGC
CGCGATCTGG TGATGCGCTG CCCGGTCTGC CTCTACGCGG GATCGCTGGT GCCGCGCGAG
CTGATCACGC TGTGCCCGCC CGGCGCCCGC GTGGTCGACA CCGCGCCGCT CGATCTCGAC
GCAATCACGA GAGAATTCGT CGCCGCCACC GAAGCCGGCC ACGATGTGGC ACGGCTGCAT
TCCGGCGATT TGTCGGTGTG GAGCGCGATG GGCGAGCAGA TCCGCCGGCT CGAGGCTCAC
GGCATCCCCT ACACCGTCAC GCCCGGCGTG CCGTCATTCG CTGCCGCCGC GGCGGCGCTC
GGGCGCGAAC TGACACTGCC CGAAGTCGCC CAGACCGTGG TGCTGACGCG CACCTCCGGC
CGCGCCTCGG CGATGCCGCC GCGCGAAAAC CTGGACGCGT ATGCGGCGAC CGGCGCGACG
CTGGCGATCC ATCTGTCGAT CCACGTGATC AATAGCGTCG TCGAGAAACT GCGCCCGCAT
TACGGCGATG ATTGCGCCGT CGCCGTCGTC GTTCGCGCGA GCTGGCCCGA AGAGCAGATC
ATCCGCGGCA CGCTGACGAC GATCGCCGCG CAGGTCGCGG AGGCCGGCAT CGACCGCACC
GCGCTGATCC TGATCGGGCC GTCGCTCGCA GCGAGCGATT TCCGCAATAG CGCGCTCTAC
AGCACGGACT ACGACCGGCG CTACCGTCGC TCCGCGGAGG ACGATCGTGC CCGCGACTGA
|
|---|
| Protein sequence | MTVHFIGAGP GAPDLITVRG RDLVMRCPVC LYAGSLVPRE LITLCPPGAR VVDTAPLDLD
AITREFVAAT EAGHDVARLH SGDLSVWSAM GEQIRRLEAH GIPYTVTPGV PSFAAAAAAL
GRELTLPEVA QTVVLTRTSG RASAMPPREN LDAYAATGAT LAIHLSIHVI NSVVEKLRPH
YGDDCAVAVV VRASWPEEQI IRGTLTTIAA QVAEAGIDRT ALILIGPSLA ASDFRNSALY
STDYDRRYRR SAEDDRARD
|
|---|
| |