| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3132 |
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| Symbol | |
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| ID | 3910933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 3578541 |
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| End bp | 3579563 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637885034 |
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| Product | binding-protein dependent transport system inner membrane protein |
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| Protein accession | YP_486739 |
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| Protein GI | 86750243 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.214587 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAGCGC TGGCGCTGTC CATCACCGGC AACCGAGGCG TGGCGATCGC GATCGCGATC
GTCCAGTGGG TGGCGCGGTT CGTCGCGGTG GTGCTGGTCA TCGCCACCTT CAACTTCGTG
CTGGTGCATG CGGCGCCCGG CGATCCCGCG CAGGTGATGG CCGGGCAGAG CGGGGCGGCC
GATGAGGAGA TGTTGACCCG GCTCCGTGCC GAGTACGGCC TCGACAAGCC GTATCCCGTG
CAACTCGCGA TCTACCTGAA GCGGATCGTG ACGCTGGATC TCGGCTACTC CTATCGGCAG
CAGCGCTCCG TGCTGTCGCT GATCGCCGAA CGCCTGCCGG CGACGCTGCT GTTGACCTGC
TGTGCGTTTC TGCTGTCGCT GTCGGCCGGC GTCTCGCTCG GCACGTTGGC CGGGGTGCGG
GCTGGTAAAT GGTCGGACAC CGCGCTGACC ATCGTGTCGC TGTTCCTCTA CGCCATGCCG
GTGTTCTGGC TCGGGTTGAT GCTGGTGCTG CTGTTCTCTG TGCAGCTCGA TTGGCTGCCG
GCGTTCGGCT ACGTCACCAT CGGCGTGCAG ATGACGCCGT TCGAACGGGC CCGCGACATC
GCCGCGCATC TGGTGCTGCC GGTGGTGTCG CTCGGTGCGG TGCATCTGGC GATCTACGCG
CGGCTGATGC GCTCGGCGGT GATCGATGTG GCGCATCAGG ACTTCATCAA GACCGCGCGC
GCCAAGGGGT TGAGGCGCGG CCAGATCATC GTCCACCACA TGCTGCGCAA CGCCGTGCTG
CCGGTGGTCA CCGTCGCCGG CATGCAGGCT GGAACGCTGG TCGGCGGCGC GGTGGTGATC
GAGACGGTGT TCGCCTGGCC CGGTCTCGGC CGGCTGACCT TCGATGCGGT GCTGCAGCGC
GACTATCCGC TGATGCTCGG CATCTTCCTG GTGATGTCGG TGATCGTCAT CGGGCTCAAT
CTGCTGACCG ACGCGATCTA CCGGATCGTC GATCCGCGCG TGTCGTTGCG TGCTGCATCC
TGA
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| Protein sequence | MRALALSITG NRGVAIAIAI VQWVARFVAV VLVIATFNFV LVHAAPGDPA QVMAGQSGAA
DEEMLTRLRA EYGLDKPYPV QLAIYLKRIV TLDLGYSYRQ QRSVLSLIAE RLPATLLLTC
CAFLLSLSAG VSLGTLAGVR AGKWSDTALT IVSLFLYAMP VFWLGLMLVL LFSVQLDWLP
AFGYVTIGVQ MTPFERARDI AAHLVLPVVS LGAVHLAIYA RLMRSAVIDV AHQDFIKTAR
AKGLRRGQII VHHMLRNAVL PVVTVAGMQA GTLVGGAVVI ETVFAWPGLG RLTFDAVLQR
DYPLMLGIFL VMSVIVIGLN LLTDAIYRIV DPRVSLRAAS
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