Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_3088 |
Symbol | |
ID | 3910889 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 3520108 |
End bp | 3520590 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637884993 |
Product | AsnC family transcriptional regulator |
Protein accession | YP_486698 |
Protein GI | 86750202 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTTGACC CAATAATGAC CCAAAAAATC GATCAAATCG ATCTTCGCAT TCTTGCCGCC ATGCAAGCTG ACTCTTCGCG TTCGCAACGC GAGCTCGCGG AGGAAGTCGG TCTGTCGCAG AATGCGTTCT GGCGGCGCCT GAAGGCGCTC GAGGCGAGCG GCGCGATCAC CGGTTACGGC GCACGCGTCT CACAGGAAGC CGTCGGTGTG CCGATGACTG TCTTCGTGAT GGTTCGAACC CGGCGGCATT CCGCCGAATG GCTCAAGCGC TTCCGGGCGC AGATCGAATC GATCTCAGAA ATCGTCGCGT TCTATCGGAT CAGCGGAGAC TTCGATTACA TGTTGAAGAT TGCCGCCCGC GATATGGGCA ACTACGACAA GGTGTATCAG ACCATCATCA ACAAGACCGA GCTGGAAACC GTGACGTCGT ACTTCTCGAT GGAAGCCATC ATCGACGGCC GGCCGCTTCC GATCGGACGC TGA
|
Protein sequence | MFDPIMTQKI DQIDLRILAA MQADSSRSQR ELAEEVGLSQ NAFWRRLKAL EASGAITGYG ARVSQEAVGV PMTVFVMVRT RRHSAEWLKR FRAQIESISE IVAFYRISGD FDYMLKIAAR DMGNYDKVYQ TIINKTELET VTSYFSMEAI IDGRPLPIGR
|
| |