Gene RPB_3088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3088 
Symbol 
ID3910889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3520108 
End bp3520590 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content57% 
IMG OID637884993 
ProductAsnC family transcriptional regulator 
Protein accessionYP_486698 
Protein GI86750202 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGACC CAATAATGAC CCAAAAAATC GATCAAATCG ATCTTCGCAT TCTTGCCGCC 
ATGCAAGCTG ACTCTTCGCG TTCGCAACGC GAGCTCGCGG AGGAAGTCGG TCTGTCGCAG
AATGCGTTCT GGCGGCGCCT GAAGGCGCTC GAGGCGAGCG GCGCGATCAC CGGTTACGGC
GCACGCGTCT CACAGGAAGC CGTCGGTGTG CCGATGACTG TCTTCGTGAT GGTTCGAACC
CGGCGGCATT CCGCCGAATG GCTCAAGCGC TTCCGGGCGC AGATCGAATC GATCTCAGAA
ATCGTCGCGT TCTATCGGAT CAGCGGAGAC TTCGATTACA TGTTGAAGAT TGCCGCCCGC
GATATGGGCA ACTACGACAA GGTGTATCAG ACCATCATCA ACAAGACCGA GCTGGAAACC
GTGACGTCGT ACTTCTCGAT GGAAGCCATC ATCGACGGCC GGCCGCTTCC GATCGGACGC
TGA
 
Protein sequence
MFDPIMTQKI DQIDLRILAA MQADSSRSQR ELAEEVGLSQ NAFWRRLKAL EASGAITGYG 
ARVSQEAVGV PMTVFVMVRT RRHSAEWLKR FRAQIESISE IVAFYRISGD FDYMLKIAAR
DMGNYDKVYQ TIINKTELET VTSYFSMEAI IDGRPLPIGR