Gene RPB_3083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3083 
Symbol 
ID3910884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3514902 
End bp3515339 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content64% 
IMG OID637884988 
Productphenylacetic acid degradation-related protein 
Protein accessionYP_486693 
Protein GI86750197 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCG CCGCGGTGAA GACGCTCGGC ATTGCCGAGC TGCAGGTGAT GGCCGACCGC 
GCCCCTTTCA TCGCGTTCTG CCAGTTGAAG GTGACGGAGG CCGATATCGA GCAGCAGGTG
CTGACGATGG AGGCGCCATT CCGTCCCGAA TTCGAGCGTG GTCCGGGCAC CAAGCAATGG
CATGGCGGAC CGCTGGCCTC GATCATCGAC ACCGTCGGCG ATTTTGCGAT CGCGATGCTG
GTCGGCGGAG GCATCCCGAC GATCAATTTT CGGGTCGACT ATCTGCGCCC CGCCGTCGAC
ACCAAGCTCG TCGCCAAAGC GACGGTGCGC CGCGTCGGCC GCACGGTGGG CGTCGCCGAT
ATCGATCTAT TCAACGACAA GGGTGTCCTG GTCGCGATCG GCCGCGGATC CTATGCGATC
CCCGCGTCGG TCAACTGA
 
Protein sequence
MSTAAVKTLG IAELQVMADR APFIAFCQLK VTEADIEQQV LTMEAPFRPE FERGPGTKQW 
HGGPLASIID TVGDFAIAML VGGGIPTINF RVDYLRPAVD TKLVAKATVR RVGRTVGVAD
IDLFNDKGVL VAIGRGSYAI PASVN