Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_3050 |
Symbol | |
ID | 3910851 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 3476888 |
End bp | 3479014 |
Gene Length | 2127 bp |
Protein Length | 708 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637884958 |
Product | hypothetical protein |
Protein accession | YP_486663 |
Protein GI | 86750167 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCGCAG GCGCAACCCG AGGTTCCGGC GGCCCCGCCC TTGCTCGACA TCTCATGTCC CGCAAAGGCG GCCAAACGGT TGAAGTCATG CCCGCACGCG GGCTGGCGGC GGAGCATCTG CGCGATCAGC TTCGGGAGCT TGTAGCGTCA TCCGCTCACG GCCGGACGGA TCGTCCGGTG CACCACGTGC ATATCGATCC TCCGCCGGAC TGCTCCGATC CGGACGCGGT TATCGCGACA TTTCTCGATC GTTACGAAGC CGAATTCGGG CTACAAAACT CGCAGCGCGC GGGTGTTTAT CACGTCAAGG CCGGTCGCAA ACACGCTCAC GTCGTCTGGT CTCTCGTTCG TGACGACGGC TCCGTTGTCT CGCTCGCGCA CGATCACGCG CGAAGAGAAA AAGTCAGCAG AATCGTGGAG TTTGAATGCG GTTTGCCGTT CACGAAGGGC AAACACAATC GCAGTGCGGC GGCAGCGCTC CTGAAAGAGG GCCGCGCCGA CGTTTCCGAC GCAATGCTTG CTGCCGGTTT GCTCGATGGT CGCCGACCGG TGGCGCATTC GACGCCGCGC CAACGCGCCC AAGCCGAGCG CACTGCCGTG CCGCTCGACG AAATCCGGAC GCAAGCTCTC GCAGCGTGGC AAGCATCGGA CGACGCGCGG TCGTTCGCCG TCGCGCTCCA CTCCTTTGAT TTTTCGGTCG CGACCGGCGA GAGCGGCTAC GTCCTGATCG ACCGGTCCGG GAGCGTGCAT AGCCTGAATC GCGTCCTCGC TGCAGCTGCA CGTGCAGAAG GCGTGGAAAA GATCACCTCC GCGGCTGTCC GCTCACGCTT GCGCGGCATC AACTTTCAAA ATGTGGAGGA AGCCAAAAAT GCCCGATCAG AACGACGCAA TACTAACTCA GGCGACCGGC GCGCGGGAGG CATCGGAGCG CCTGTTACCG CTCCTGAGCC TCCTCGACGA GCAGACCGGC GAGACGAGCC CGTTGGACGA GCTCAAGGGC TTGTTGCAGG CGATCGTCGA GATTTTGGGT CATCACACGA GCGCGTTGCA GCGGCTCGAA AGCGCATCCG TGACCACGCC GCCGCGCAAC GCATAGGCGA CATCGATCTG CAAGACTTAA TTCGTAACAA GGGGGAAGTG ATGGCAAAGA TAAGAGCTCA GAACTTTAAG GCGAAAATCC TCGCAGAAGT CGCCCCCGCG GGGTTCAACG CGCATGCATT TTCCGATGAT CTGCGCATGA TTCAGAAACC GACGCCCGCG CGACCGGCGG CTCGGATTAT GATGATCGAT GGCGGCTGGC TTGAGTACGA TGCAGCCGGG CGTAGCATCC GAACATGGGG TCCCACCGGC CGCGCGCAAA TACTCGCCGC CGCGCTCGCC GATAAGCTCG GCGTCGAGCC GGAGCATCTG GCGAAAACCG CATCAGTCGG AGCCGATGTC GACGCTCTGA AAGTGACAAA AGTGTCGGAA GACACAGTCA ACTCGCTGGT TTTGTGGTGG ACCGCTCGTG GCTATTCGGC GACCGACGGC CCAGACGGAT GCTGGGTCAC GGCAGGCTAC GCTCGCATCC GAGACACTGG CGATCAGCTT GAGATTCACG GCGGCCTGAC GGTCAAAGTC ATCGATGCAA CGATCCTGAA AGCAAAGGAA GCTTGGGGCG GCGGCGTGTA TCTCGACGGC GACTGGACTC AAGATGAGCA AGATAAGCTC TGGATCGCCG CCCAGCGCGC GGGCGTAAAA GTCGAAAATT GCCAGCCGTC GCTGTCGATT CAAGATGCGT GGCAGCGGGA GCAAGCCGCA TCCGCGAAAT CCATAAAAAC GATTTGCGCC GCGCGATCCG CAATCGCAGA AGCTACAGAC GTTCGCGATG CCGCCGCCGG TGATCTCGAA GCTATGCACC GGCTTCCGCA GCCGTTGCAG GCCTTCGTCG TCTCACACCT CGACGACGAT CAGCGCAGGC ATCTGTCTGG GCAGTCCGTC GCCGACATCA CCGCCGCCTT GCCGCGCTTC CGCGACCTCG GTCAGTCTGA ACTCGAGGAA TACGAGCGCA CCGGCCGCAC GTTCACGCCG CCGAAGCCGC GTCGCGATGA TCGCGACCGC AACGCCGCGC ACACGTATTC GCAATGA
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Protein sequence | MIAGATRGSG GPALARHLMS RKGGQTVEVM PARGLAAEHL RDQLRELVAS SAHGRTDRPV HHVHIDPPPD CSDPDAVIAT FLDRYEAEFG LQNSQRAGVY HVKAGRKHAH VVWSLVRDDG SVVSLAHDHA RREKVSRIVE FECGLPFTKG KHNRSAAAAL LKEGRADVSD AMLAAGLLDG RRPVAHSTPR QRAQAERTAV PLDEIRTQAL AAWQASDDAR SFAVALHSFD FSVATGESGY VLIDRSGSVH SLNRVLAAAA RAEGVEKITS AAVRSRLRGI NFQNVEEAKN ARSERRNTNS GDRRAGGIGA PVTAPEPPRR ADRRDEPVGR AQGLVAGDRR DFGSSHERVA AARKRIRDHA AAQRIGDIDL QDLIRNKGEV MAKIRAQNFK AKILAEVAPA GFNAHAFSDD LRMIQKPTPA RPAARIMMID GGWLEYDAAG RSIRTWGPTG RAQILAAALA DKLGVEPEHL AKTASVGADV DALKVTKVSE DTVNSLVLWW TARGYSATDG PDGCWVTAGY ARIRDTGDQL EIHGGLTVKV IDATILKAKE AWGGGVYLDG DWTQDEQDKL WIAAQRAGVK VENCQPSLSI QDAWQREQAA SAKSIKTICA ARSAIAEATD VRDAAAGDLE AMHRLPQPLQ AFVVSHLDDD QRRHLSGQSV ADITAALPRF RDLGQSELEE YERTGRTFTP PKPRRDDRDR NAAHTYSQ
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