Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_3005 |
Symbol | |
ID | 3910804 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 3422907 |
End bp | 3423794 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637884911 |
Product | 3-hydroxyisobutyrate dehydrogenase |
Protein accession | YP_486618 |
Protein GI | 86750122 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.125312 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGCGCTC CCACAAAGGT CGGCTTCATC GGTCTCGGCA AGATGGGCCA TGGCATGGCC GGCCGGCTGC TCGACGCCGG CTTCGACGTC GCGGTATGGA ATCGCAATCC GGCAAAGGCC GACGCTCTGA TCAGCCGCGG CGCGCGCCGC GCTGCGACGC CGGCCGAGGC CGCACACGCC GCCGATGCGA TCGTGACCAT GGTCGCCGAT GACGAAGCGT CGCAAGCCGT CTGGCTCGGC GCCGATGGTG TCGCGACGAC GGCCAAGGTT GGTGCTGTCG CGATCGAATG TTCGACCGTC TCGCATCAAC ATGCGCTCGA ACTCGCCGCG GCGCTGCGCG CGCGTGGGTT GATCTACATC GATTGTCCCG TCACGGGCCT GCCCGACGCT GCCGCACGCG GCGAACTCAC CTTGCTGATT GGCGCCGAGC CGAACGATCT CGACGCGGCG CGCCCCTATC TTGCGCCGCT TGGCCGGACG ATCCGGCATT TCGGTCCGGT CGGGTCCGGC ACTGTCTACA AGCTGATCAA CAATCTGATG GGCGCGATCC AGATCGCCGG CCTTGCCGAA GGCATCGCGA TCGCGGAGCG CGCCGGACTC GACATGGCAC TGGTGCGTGA AGCGATCGCG GGCAGTGTCG TTGCCAGTCC GCAGGTGCTG CGGCAGGCAC CTCGGATGAT CGACCGCGAC TTCACCAACG CCACCTTTAC CGCGGGGCTC CGGCACAAAG ACGCGCGCTA CGCGATCGAA CTGGCGAAAG CGCTGCGATT GGAGCTGCCG CTGTCGCTCG CAGCGGTCGC GAGTTATGCG CACGCGACCG ATGCCGCGCC CGACGACGAC GAGGCAAAGA TCGTCGAGAT CGTCTCGAAG CCACGCCCGC GCGAGTAA
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Protein sequence | MGAPTKVGFI GLGKMGHGMA GRLLDAGFDV AVWNRNPAKA DALISRGARR AATPAEAAHA ADAIVTMVAD DEASQAVWLG ADGVATTAKV GAVAIECSTV SHQHALELAA ALRARGLIYI DCPVTGLPDA AARGELTLLI GAEPNDLDAA RPYLAPLGRT IRHFGPVGSG TVYKLINNLM GAIQIAGLAE GIAIAERAGL DMALVREAIA GSVVASPQVL RQAPRMIDRD FTNATFTAGL RHKDARYAIE LAKALRLELP LSLAAVASYA HATDAAPDDD EAKIVEIVSK PRPRE
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