| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3001 |
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| Symbol | |
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| ID | 3910800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 3415825 |
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| End bp | 3419559 |
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| Gene Length | 3735 bp |
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| Protein Length | 1244 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637884907 |
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| Product | hypothetical protein |
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| Protein accession | YP_486614 |
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| Protein GI | 86750118 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.11101 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCCAC AGGAGCGTAT CCTGCGCGTC GGCGCAAAAC CCTCCCTCGG CGATCAGGCT
GCGACAAAGC GCGTGCACCG AGAGGCCATG GCCAGCGACC CATCGCAAAA CGCATCCGGG
CCGCATCCCC ACCACGACGC CGATCATTGG CAGGAGAGCG GCTGGGATCC CGAGCACGAG
GAGGCCGGGC GCCATCGCGC CCGCAAATTG CTGGCGAGAC GGGGGCTCGG CTTTCACCGG
GTGGACGATT CGATGCGGCG CTGGCAGCAC CGATTGTCGG GAGCCCCCTG GTTGAGGCGG
ATGGCGATCG CACTGCTGGT GGTCGGCTTC GTGCTGGCGG CCGGTTTTGG TGGTCTGTGG
CTGCGGCTCG GTGCCGGACC GATCAATCTC GATATGGCGA CGCCCTGGCT GGCCGACGCG
ATCGAAGAGA ACATCGGCAA CGGCAACACC GTCGAGGTCG GCGGAACCCA GATCGAGCGG
GTCGGACGGA TTCGCGTCGC GGTTCGGATC CGCGATATCG TGGTGCGCGA CCGCGACCAT
GTGGTTGTTG CCACTGCGCC GAAAGCGGAA GTCCGGCTGT CGGGCCGCGC CCTGCTGATC
GGCAAATTGC GCGCGGAGAG TCTGCGCCTG GTCGATGCCG AACTGGCGAT CCGGATCACG
CCGGATGGCC AGGTGACGGT GTCGACCGGC GACACCGAGC GGCCGATTGC GACTGGCGTC
GCCTCGACTC GCAAGCCACC GGAATTCACC TTGCCGGGCC AGTCGCCCGC CGCTGCCACG
GCGCCCGGAC AAGACGGCAC AGTGTCGCCG GCGCAGCCGG GCGGTGCGGC GCCGCCCGCT
GCGGCCGACC GGGACGGCGA TGCGATGAAG AGCCTGCTCG CCGGGCTCGA TTGGCTCGAC
AGCCTGAGCC TGACGGGGCT CGATGGCCAG AACCTCAACG AGATCGGCCT GAAGAACGGC
AATCTCGTCG TCGACGACCA GCAGCGCGGC AATCGCTGGA GCTTCGAGAA CATCAGTCTC
AGCCTGCGCC GTCCCAGCCG CGGCGGCGTC GCGCTCAGCT TCGGCGAGGA GGGGGCGAAG
GCGTGGTCGC TGCGGGTTCA GGTCGGTCCG CCTCAGGATG GCGTGCGCAC CGTCGAGTTG
CACGCCAATC AGGTGCCCAC GCGCAACATC CTGCTGGCGC TGCGGCTGAA GAACCTGACT
TACGGCGCCG ACTTCCCGCT CACCGGCGAT CTCAAGGGTG AAATCGGTCG CGACGGTCTG
CCGACCTATT TCCGCGGCAA GCTGGTCGCC GGCGCCGGCA CCGTGATCGA TTACGACACG
CCCGATTATC CGATGGCGAT CGATCAGGCG GAATTCAATT TCGAATGGGA TGCCAACCGC
CGCGTGCTGA TGGCGCCGTT CAAGATCATC GCCGGCGCCA ACCGCGTCAC GCTGCTGGCG
GCGCTCGAGC CGCCGAACGG CAGTACACCG GATTGGCGGC TCGCTTTGTC GGGCGGCACC
ATCGTGCTGC CCGGCGCGGA AGGCGAAGCG CCGCTGATCT TCAACCGCAT CGCCGTTCGA
GTCAGCTTCG ACACCGACCA TCGCCGGGTG CTGCTGACCC AGGCCGACAT CAACAACGGC
GAGATCGGCG TCGCCGGCTC CGGCAGCATC GACTACAGCG GCGAGCCGCG ACTGCAACTC
GGACTGGCCG GTACGCCGAT GTCGGTGTCG GCGCTGAAGC GGATGTGGCC GATCCTGGTG
GTGCCGGAAG TTCGGGAATG GGTCTATGAG CGGATCGACA AGGGATCGAT CCAGAGCATC
GATATCGCCG TCAATTCACC GGTGAAAAAC CTGTCGCGGC GAGGGCCGCC GATTCCGGAC
GAAGGGCTGC TGGTCAATAT CATCGGCACC GGTGCGACCA TCCACCCGGT CGACGGCATG
CCTTGGGTGC GCGACGCAGA TATGCGGGTT CGCGTCACCG GCCGCACCGC TGCGGTCGCG
ATCGCGCAAG CCGGCGCCGA TACGCCCAGC GGCCGCAAGA TCGCGCTATC GGATATCCTG
TTCGAGGTGC CGGACATGGC GCCGAAGCCG TCGCCGTCGC GGATCAAGTT CAAGCTGGAC
GCACCGGTGC CGGCCGTCGC CGAGGTGCTG TCGTCGGGCC GGCTCAGCGA CGTCAGCGAC
GTCCCGATGG ATCCCAACAC CAGCAAGGGC GCCGTCAGCG CGCAGGTCAT GCTCGGCATG
CCGATCCAGC GCGAACTGAC CAAGGCCGAC ACCACTTATT CGATCAATGC CGACGTCACC
GGCTTTTCCG CCGACAAGCT GGTGATGGGG CAGAAGCTCG AGGCGAACAC GCTGAAGGTG
AACGCCAACA ATCAGGGCTA TCAGGTCAAG GGCGACGTCA AGATCAACGG GCAGCCCGCG
ACGCTCGACT ATCGCAAGCC GGCGCAGGGC GAGGCCGATG TCCGGTTGCA GTCGACGCTG
GATGACGCCA GTCGCGCCAA GTTGGGGCTC GATCTCGGCA GCGCGGTTTC CGGCGCCGTG
CCTGTGAAGC TGGTCGGCAA GATCGGCGAC AGCGACCACG AGACCAAGTT CGGTATCGAC
GCGGACCTCA CCGCCCTGAA GCTCGACAAC ATCCTGCCCG GCTGGACCAA GCCGTCGGGC
AAGACGACCC GCGCGACGTT CAACGTCATT CAGAAGCCGC AGGCGATCCG GTTCGAGGAC
ATTCAGATCG AAGGCAACGG CACGCTGATC AAGGGCTCGC TCGAAGTCGA TGGCGACGGC
GACCTGATCA ACGCGAACTT TCCGGTGTAT TCGCCCTCCG AAGGCGACAA GACGACGCTG
AAGGCCGAGC GCGGCCAGGA CGGCGTGCTC AAGGTGGTGA TGCGCGGCGA CGTGTTCGAC
GGCCGCGGTT TCATCAAGTC GGCGCTGTCG GGCACCCAGG CCGAACCGAA GGCCAAGACC
AAGAGCCTCG ATTTCGATCT CGATCTCAAG CTCGGCGCTG TCGCAGGCTA TTTCGGCGAG
GCGCTGCGCA GCCTCGACGT CAAAATGGTC CGCCGCAACG GTGCATTCCG CACCTTCACG
CTGAGCGGCA AGCTCGGCCG CGATACGCCG ATCACCGCCG AATTGCGCGG CAAGAATCGC
GGCCGCGAGG TGATCGCTCT CGAGACCAAC GACGCCGGCG CATTCCTGCG CTTCTCCGAC
ACCTACTCGA AAATGTACGG CGGCCAGCTT GCGCTGGCGG TCGAGCCGCC GACCGCGGAG
CCCCGCCAGA AGGAAGGGCT GATCAACGTC CGCGACTTCA CCGTCAAGGG AGAGGCCGCC
CTCGAGCGCG CCGCCGCCGG CGCGCCCGGC GGCACGTCGA CGGGGGTGGC GTTCTCACGG
CTGCGGGCCG AGTTCACCCG GGACAACGGC CAGCTGTCGG TGCGCGACGG CGTGGTGAAG
GGGCCGACGA TCGGTGCGAC GATCGAGGGC TCGATCGACT ATCCCGCCAA CCAGGTCCGG
ATGAGCGGCA CCTTCGTGCC GATGTATGGT TTGAACAACA TGTTCGGGCA GATCCCGATC
GTCGGCCTGT TTCTCGGCGG CGGCAGCAAC GAGGGCCTGA TCGGCGTGAC CTATGAGGTC
GTCGGGACGC CGGGGCAGCC GGTGCTGCGC GTCAATCCGA TCTCGGCGAT GGCGCCCGGC
GTGCTGCGCA AGATCTTCGA ATTCAACACC GGCCGGCAGA ACAGCGGCGC CGATTTCCCG
GCGCCGCCGA ATTGA
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| Protein sequence | MPPQERILRV GAKPSLGDQA ATKRVHREAM ASDPSQNASG PHPHHDADHW QESGWDPEHE
EAGRHRARKL LARRGLGFHR VDDSMRRWQH RLSGAPWLRR MAIALLVVGF VLAAGFGGLW
LRLGAGPINL DMATPWLADA IEENIGNGNT VEVGGTQIER VGRIRVAVRI RDIVVRDRDH
VVVATAPKAE VRLSGRALLI GKLRAESLRL VDAELAIRIT PDGQVTVSTG DTERPIATGV
ASTRKPPEFT LPGQSPAAAT APGQDGTVSP AQPGGAAPPA AADRDGDAMK SLLAGLDWLD
SLSLTGLDGQ NLNEIGLKNG NLVVDDQQRG NRWSFENISL SLRRPSRGGV ALSFGEEGAK
AWSLRVQVGP PQDGVRTVEL HANQVPTRNI LLALRLKNLT YGADFPLTGD LKGEIGRDGL
PTYFRGKLVA GAGTVIDYDT PDYPMAIDQA EFNFEWDANR RVLMAPFKII AGANRVTLLA
ALEPPNGSTP DWRLALSGGT IVLPGAEGEA PLIFNRIAVR VSFDTDHRRV LLTQADINNG
EIGVAGSGSI DYSGEPRLQL GLAGTPMSVS ALKRMWPILV VPEVREWVYE RIDKGSIQSI
DIAVNSPVKN LSRRGPPIPD EGLLVNIIGT GATIHPVDGM PWVRDADMRV RVTGRTAAVA
IAQAGADTPS GRKIALSDIL FEVPDMAPKP SPSRIKFKLD APVPAVAEVL SSGRLSDVSD
VPMDPNTSKG AVSAQVMLGM PIQRELTKAD TTYSINADVT GFSADKLVMG QKLEANTLKV
NANNQGYQVK GDVKINGQPA TLDYRKPAQG EADVRLQSTL DDASRAKLGL DLGSAVSGAV
PVKLVGKIGD SDHETKFGID ADLTALKLDN ILPGWTKPSG KTTRATFNVI QKPQAIRFED
IQIEGNGTLI KGSLEVDGDG DLINANFPVY SPSEGDKTTL KAERGQDGVL KVVMRGDVFD
GRGFIKSALS GTQAEPKAKT KSLDFDLDLK LGAVAGYFGE ALRSLDVKMV RRNGAFRTFT
LSGKLGRDTP ITAELRGKNR GREVIALETN DAGAFLRFSD TYSKMYGGQL ALAVEPPTAE
PRQKEGLINV RDFTVKGEAA LERAAAGAPG GTSTGVAFSR LRAEFTRDNG QLSVRDGVVK
GPTIGATIEG SIDYPANQVR MSGTFVPMYG LNNMFGQIPI VGLFLGGGSN EGLIGVTYEV
VGTPGQPVLR VNPISAMAPG VLRKIFEFNT GRQNSGADFP APPN
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