Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_3000 |
Symbol | |
ID | 3910799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 3415222 |
End bp | 3415788 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637884906 |
Product | cytochrome B561 |
Protein accession | YP_486613 |
Protein GI | 86750117 |
COG category | [C] Energy production and conversion |
COG ID | [COG3038] Cytochrome B561 |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.426718 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0305282 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACGA CCACCTTTGA ATCCACGGGG AAGAGCCCGA GCACGTATGG CGGCTTCGCC GTCGCCCTTC ATTGGCTGAT CTTCTTCGCC GTGATCGCGC TGTTCGCCTC CATGAATTAT GCCCAGGGCC TGGAGAAAGC CGACCCGCTG CGCGGCACGC TGTACAATTG GCACAAGGCG ATCGGCACGG TGGTGCTGGG CCTCGCGGTG CTGCGCGTTC TGTGGATCAG GATCCACGGT GCGCCGGACC TGGTGCCGTC GCCGCGGATC ACCGAGGTGA TCGCCCGGAT CAGCCACGGC CTGCTGTATC TGCTGCTGAT CGCCCTGCCC GCCACCGGCG TCGGCATGAC GCTGTTCTCC GGCCGCGGCA TCGATCTGCT CGGCATCCCG CCGCTGCTCG AAGCCAACAA GGCGGTGGCC GGCGCACTGC ACGCGGCCCA CGGACCGCTG TTCCTGGCGA CGGTCATCGT GGTGTTCATC CACGTCATCG GCGCGCTGTG GCATCAATAC GGCCGCCACG ACGCCACGCT CGGCCGCATG GTGCCCTGGC TGCGCGTCAA GGAGTGA
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Protein sequence | MTTTTFESTG KSPSTYGGFA VALHWLIFFA VIALFASMNY AQGLEKADPL RGTLYNWHKA IGTVVLGLAV LRVLWIRIHG APDLVPSPRI TEVIARISHG LLYLLLIALP ATGVGMTLFS GRGIDLLGIP PLLEANKAVA GALHAAHGPL FLATVIVVFI HVIGALWHQY GRHDATLGRM VPWLRVKE
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