Gene RPB_2995 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2995 
Symbol 
ID3910794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3408978 
End bp3410144 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content67% 
IMG OID637884901 
Productaminotransferase, class V 
Protein accessionYP_486608 
Protein GI86750112 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0581835 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGCCG ACCGGGTGTA TCTCGACTGG AATGCGACGA CGCCGCTGCG GCCGCAGGCG 
CGGGCGGCGA TGGCCGCGGC GATGGAGCTG GCAGGCAACC CCTCCTCGAT TCACGCCGAG
GGCCGGGCTG CGCGTGGGCT GGTCGAGCAG GCGCGGGCGA TGGTCGCGGC GGCGGTCGGG
GCCGCGCCGC GCAATGTCGT GTTTACGTCA GGCGGCACCG AGGCCAACAC GCTGGCGCTC
ACGCCCGGAC TCGGGATCGG CTCCCAACGC ATTGAGCAGC TTGTCGTTTC GGCGATCGAA
CATGCTTCGG TGCTGACCGG CGGGCGGTTT CCGCACGGCA GCGTCGCGAC CGTTCAAGTC
TCACGTGAAG GCGTTGTCGA TCTGGATCAC CTGCGCGGGT TGCTGGCCGG CGGGCACCCG
GCGCTGGTGT CGGTGATGCT CGCCAACAAC GAGACCGGCG CGCTGCAACC CCTTCCGGCG
ATTGCTGAAA TCGTCCATGC CGCGGACGGC CTGCTGCATG TCGATGCGAT TCAGGCGCTG
GGGAAAATCC CGTTCACGGT CAATGAATTG GGAGCCGACT TGGTGTCGCT GTCGGCACAC
AAGCTGGGCG GGCCGACCGG TGTCGGCGCT CTCGTGTTGA CGGAGCGGCT GGCCGGTCTG
GAGCCTCTGC TGCGGGGCGG CGGCCAGGAG CTGGGTCGGC GGGCCGGAAC CGAGAATGTC
GCCGGGATCG CAGGCTTCGG CGCGGCGGTT GCGGCGGCGA TGGCGGGGAT GGAATCCGAC
ATGGCGCGGA TCGAAAACCT GCGGAATCGG CTCGAGGCAA ACCTGAGGCA AACCGAAGGC
AGCGTCATCA TCGCCGAATC CGTGCCGCGG CTGCCGAACA CCACGCTGGT CGCGCTGCCC
GGATTGCGCG CCGAGACCGC GGTGATCGGC TTCGACCTCG CCGGCGTCGC GGTGTCGTCC
GGCTCCGCGT GTTCGTCGGG CAAAGTTCGC GCGTCGCATG TGCTGGAGGC GATGGGGTTT
GGTCCGGAAC TTGCTCAGTC GGCGATACGG CTCAGTCTCG GCTGGTCGAG TAGCGAATCC
GACATTGATC GATGCTTGAA GGCTTGGCGA AAGCTTGCGG GCAACCTAAC TAAAAGGGAT
CATGAAACAG AGCTTGAACG GTTCTAA
 
Protein sequence
MTADRVYLDW NATTPLRPQA RAAMAAAMEL AGNPSSIHAE GRAARGLVEQ ARAMVAAAVG 
AAPRNVVFTS GGTEANTLAL TPGLGIGSQR IEQLVVSAIE HASVLTGGRF PHGSVATVQV
SREGVVDLDH LRGLLAGGHP ALVSVMLANN ETGALQPLPA IAEIVHAADG LLHVDAIQAL
GKIPFTVNEL GADLVSLSAH KLGGPTGVGA LVLTERLAGL EPLLRGGGQE LGRRAGTENV
AGIAGFGAAV AAAMAGMESD MARIENLRNR LEANLRQTEG SVIIAESVPR LPNTTLVALP
GLRAETAVIG FDLAGVAVSS GSACSSGKVR ASHVLEAMGF GPELAQSAIR LSLGWSSSES
DIDRCLKAWR KLAGNLTKRD HETELERF