Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_2893 |
Symbol | |
ID | 3910687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 3294334 |
End bp | 3295164 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637884794 |
Product | hypothetical protein |
Protein accession | YP_486506 |
Protein GI | 86750010 |
COG category | [S] Function unknown |
COG ID | [COG3827] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.75646 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGCAGC CTGCAAGGGC CCAAGAGCCT TCCATGGAGG AGATTCTGGC GTCGATCCGT CGTATCATCG CGGACGATGA AGCCAAGCCC GCGACCGCGG CCAAACCGCC GGTCGCCGCC GCCCCGAAGC CGGAGCCGCC GAAACCGGTT CCAACGCCGA GCAAGCCCGC GGCCATGACC CCACCTCCGC CCGCCCCGAG CCCGGCCCCG CAGGCCGCAG CCCCCAAGCC AGTCGCGCCG CCGAAACCGG CGCCTGCGCC ACCGCCGCCC GCGCCGGCCG CGGCGGAGGC CAGCAACAAT CAGGACGACA TCGACGCGCT GCTGGCGGGG CTCGATGCCT CGACCACCGA GGAAGAGGTG CGGCCGCCGC AGCCCGACGG CGACGTGCTC GAACTGACCG ACGAGATGGC CCTGCCGGAG CCTGAGCCGG AGCCGGAGCC GGAGCCTGCT CCGACGCCGA CCCCGCTGCC GCAGGCGTCG TACCGCAAGC CGGTCGAAGA CGATCTCGAA TTCGCCGAAG CCGCGGCGCC CAGGCCGGCG GCGCCGGAGC CGAAGCCGGC GATGCCGGAG CCCGCCTACC AGCCGTCGAC ATCCTCCTGG TCCGAGGATC CGCCGCAGGC GCCGATCATG TCGCGCGCCA CGGTGTCGGC CGTGGAATCG GCGTTCAATT CGCTCGCCAA CACGGTGCTC AGCAACAACG CGCGCACCCT CGAGGATCTC GTCAAGGAGA TGCTCCGGCC GATGCTGAAA TCCTGGCTCG ACGACAATCT GCCGACCCTG GTCGAGCGGA TCGTGCGCCA GGAAATCGAG CGGGTGTCGC GCGGCCGCTA G
|
Protein sequence | MTQPARAQEP SMEEILASIR RIIADDEAKP ATAAKPPVAA APKPEPPKPV PTPSKPAAMT PPPPAPSPAP QAAAPKPVAP PKPAPAPPPP APAAAEASNN QDDIDALLAG LDASTTEEEV RPPQPDGDVL ELTDEMALPE PEPEPEPEPA PTPTPLPQAS YRKPVEDDLE FAEAAAPRPA APEPKPAMPE PAYQPSTSSW SEDPPQAPIM SRATVSAVES AFNSLANTVL SNNARTLEDL VKEMLRPMLK SWLDDNLPTL VERIVRQEIE RVSRGR
|
| |