Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_2809 |
Symbol | |
ID | 3910602 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 3199644 |
End bp | 3200348 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637884709 |
Product | LexA repressor |
Protein accession | YP_486422 |
Protein GI | 86749926 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
TIGRFAM ID | [TIGR00498] SOS regulatory protein LexA |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.33074 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.312711 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGACGC GTAAACAATT CGAGCTTCTG AAATTCATCA ACGAGCGGCT GAAAGAAGCC GGCGTTCCCC CCTCGTTCGA CGAGATGAAG GATGCGCTCG ACCTGCGTTC CAAATCGGGC ATTCACCGCC TGATCACGGC GCTGGAAGAG CGTGGCTTCA TCCGCCGCCT GCCCAACCGC GCCCGTGCCA TCGAGGTGAT CAAGCTGCCC GACCTCGGCG GCAATAGCGG CGCTCGCCGC GGTTTCACCC CCAGCGTGAT CGAAGGCAAT CTCGGCAAGG TGCGGCCGCC GAGCCCGCAG CATGCCGAAG ACGACTCCGA TCGCAACGTC GCGGTGCCGG TGATGGGCCG GATCGCCGCC GGCACGCCGA TCGAGGCGCT GCAGACCCGC AGTCACACCA TCAGCGTGCC GCCGGACATG CTCGGTTCCG GCGAGCACTA CGCGCTCGAA GTGCGCGGCG ATTCGATGAT GGATGCCGGC ATCCTCGACG GCGACATGGC GCTGATCCAG CGCAACGAGA GCGCCGACAC CGGCGACATC GTGGTGGCGC TGATCGACGA GGAGGAAGCG ACGCTGAAGC GCTTCCGCCG CCGCGGCGCA TCGATCGCGC TGGAGCCTGC CAATTCCGCC TACGAGGTCC GTATCCTGCC GCCCAACCGG GTGCGGATCC AGGGCAAGCT GATCGGTCTG TATCGCAAAT ACTGA
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Protein sequence | MLTRKQFELL KFINERLKEA GVPPSFDEMK DALDLRSKSG IHRLITALEE RGFIRRLPNR ARAIEVIKLP DLGGNSGARR GFTPSVIEGN LGKVRPPSPQ HAEDDSDRNV AVPVMGRIAA GTPIEALQTR SHTISVPPDM LGSGEHYALE VRGDSMMDAG ILDGDMALIQ RNESADTGDI VVALIDEEEA TLKRFRRRGA SIALEPANSA YEVRILPPNR VRIQGKLIGL YRKY
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