Gene RPB_2809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2809 
Symbol 
ID3910602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3199644 
End bp3200348 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content65% 
IMG OID637884709 
ProductLexA repressor 
Protein accessionYP_486422 
Protein GI86749926 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID[TIGR00498] SOS regulatory protein LexA 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.33074 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.312711 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACGC GTAAACAATT CGAGCTTCTG AAATTCATCA ACGAGCGGCT GAAAGAAGCC 
GGCGTTCCCC CCTCGTTCGA CGAGATGAAG GATGCGCTCG ACCTGCGTTC CAAATCGGGC
ATTCACCGCC TGATCACGGC GCTGGAAGAG CGTGGCTTCA TCCGCCGCCT GCCCAACCGC
GCCCGTGCCA TCGAGGTGAT CAAGCTGCCC GACCTCGGCG GCAATAGCGG CGCTCGCCGC
GGTTTCACCC CCAGCGTGAT CGAAGGCAAT CTCGGCAAGG TGCGGCCGCC GAGCCCGCAG
CATGCCGAAG ACGACTCCGA TCGCAACGTC GCGGTGCCGG TGATGGGCCG GATCGCCGCC
GGCACGCCGA TCGAGGCGCT GCAGACCCGC AGTCACACCA TCAGCGTGCC GCCGGACATG
CTCGGTTCCG GCGAGCACTA CGCGCTCGAA GTGCGCGGCG ATTCGATGAT GGATGCCGGC
ATCCTCGACG GCGACATGGC GCTGATCCAG CGCAACGAGA GCGCCGACAC CGGCGACATC
GTGGTGGCGC TGATCGACGA GGAGGAAGCG ACGCTGAAGC GCTTCCGCCG CCGCGGCGCA
TCGATCGCGC TGGAGCCTGC CAATTCCGCC TACGAGGTCC GTATCCTGCC GCCCAACCGG
GTGCGGATCC AGGGCAAGCT GATCGGTCTG TATCGCAAAT ACTGA
 
Protein sequence
MLTRKQFELL KFINERLKEA GVPPSFDEMK DALDLRSKSG IHRLITALEE RGFIRRLPNR 
ARAIEVIKLP DLGGNSGARR GFTPSVIEGN LGKVRPPSPQ HAEDDSDRNV AVPVMGRIAA
GTPIEALQTR SHTISVPPDM LGSGEHYALE VRGDSMMDAG ILDGDMALIQ RNESADTGDI
VVALIDEEEA TLKRFRRRGA SIALEPANSA YEVRILPPNR VRIQGKLIGL YRKY