Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_2783 |
Symbol | |
ID | 3910576 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 3173039 |
End bp | 3174268 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637884683 |
Product | major facilitator transporter |
Protein accession | YP_486396 |
Protein GI | 86749900 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.35447 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCAGG GCGACAGTGC GGTCGTTCGG CCGAGCCTGC CGCCCGCGTT GAAGATCATT GCGCTGTCGG GCTTTGCCGC TAGCCTGTCC GCCCGCGCGC TCGATCCGGT GCTGCCGCGG ATCGCGTCGG AATTCTCGGT CTCGATCGCC ACCGCCGCAG GTCTCGCCGC CGTGACGGCC TTCACCTTCG CGGTGGTGCA GCCGGCCATC GGTGCGCTCG CCGACATGTT CGGCAAAGCT CGACTGATGA TCGTCTGCCT CGCATTGCTC GGCTTCGCGA GCCTGCTCGG CGCGGTGTCG TCGTCATTCG AGGTCCTGTT TCTGTGCCGG ATTCTCGCCG GCATCGGAGC CGGCGGCGTG TTCCCGGTGG CGCTGGGGCT CACGAGCGAT CTGGTCGAAC CTGGGCGGCG GCAGGTCGCG ATCGGGCGCG TGCTCGGCGG CTCGATGACC GGCAATCTGC TCGGCGCCTC GGCCTCCGGC GTGATCGGCG ACGTGCTCGG CTGGCGCGGT GTGCTGGCCG TGCTCGGCGT CCTGGTGATC GTCGCTGCGT TGGCAGTGTC GTTCGGCTTT CGCAATAAAC CGATGCGTCC TGGCGCACCG ATGGATCTGG CGGCCTTACG CCGCGGCTAT CGGACCATCT TCAGCAATCC GAATGCTCCG ATCTGCTTCG CAGCAGTATT GGTCGAGGGG ACCTGCGTGA TGGGGGCGTT CCCCTTCGTC GCCGCCTTCC TGCACGATCA GGGGCAGGAA TCACTGGCGG TCGCCGGGCT GGTGATCGCG GGCTTTGCTG TCGGCGGGCT GCTCTACACG CTGACCGTCG CACGACTGCT GCCACGGCTC GGCGTTCGGG GCATGATGAT CGGTGGCGGC GCGCTGGTCG GCCTGCAGTT GGCGATCATC GCGTTCGGGC CCCCGTGGCA GGCCCAGGCC GTGGCGTTCG TGGCGATGGG GATGGGCTTC TACATGCTGC ACGGCTGCGT GCAGGTGTTC GCCAGCGAGC TCAGTGAGAC CGCGCGCGGC ACCGCGATGT CGCTGCATTC GTTCTTTTTC TTCCTCGGCC AGACGACCGG CCCGATCGCC TACGGCTTCG GCCTCGCTCA TGCCGGTAAA GTTCCCACGA TGCTGATTGC CGCCATCACG ATGCTGGCGC TGGGGTTTAT TCTTGCGGTG GTGTTGCGAC CGCGACCGCC GACTGATGCG GTCGAGAGCC CACGGCCGGA TCCTGCGTGA
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Protein sequence | MSQGDSAVVR PSLPPALKII ALSGFAASLS ARALDPVLPR IASEFSVSIA TAAGLAAVTA FTFAVVQPAI GALADMFGKA RLMIVCLALL GFASLLGAVS SSFEVLFLCR ILAGIGAGGV FPVALGLTSD LVEPGRRQVA IGRVLGGSMT GNLLGASASG VIGDVLGWRG VLAVLGVLVI VAALAVSFGF RNKPMRPGAP MDLAALRRGY RTIFSNPNAP ICFAAVLVEG TCVMGAFPFV AAFLHDQGQE SLAVAGLVIA GFAVGGLLYT LTVARLLPRL GVRGMMIGGG ALVGLQLAII AFGPPWQAQA VAFVAMGMGF YMLHGCVQVF ASELSETARG TAMSLHSFFF FLGQTTGPIA YGFGLAHAGK VPTMLIAAIT MLALGFILAV VLRPRPPTDA VESPRPDPA
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