| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2783 |
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| Symbol | |
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| ID | 3910576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 3173039 |
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| End bp | 3174268 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637884683 |
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| Product | major facilitator transporter |
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| Protein accession | YP_486396 |
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| Protein GI | 86749900 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.35447 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCAGG GCGACAGTGC GGTCGTTCGG CCGAGCCTGC CGCCCGCGTT GAAGATCATT
GCGCTGTCGG GCTTTGCCGC TAGCCTGTCC GCCCGCGCGC TCGATCCGGT GCTGCCGCGG
ATCGCGTCGG AATTCTCGGT CTCGATCGCC ACCGCCGCAG GTCTCGCCGC CGTGACGGCC
TTCACCTTCG CGGTGGTGCA GCCGGCCATC GGTGCGCTCG CCGACATGTT CGGCAAAGCT
CGACTGATGA TCGTCTGCCT CGCATTGCTC GGCTTCGCGA GCCTGCTCGG CGCGGTGTCG
TCGTCATTCG AGGTCCTGTT TCTGTGCCGG ATTCTCGCCG GCATCGGAGC CGGCGGCGTG
TTCCCGGTGG CGCTGGGGCT CACGAGCGAT CTGGTCGAAC CTGGGCGGCG GCAGGTCGCG
ATCGGGCGCG TGCTCGGCGG CTCGATGACC GGCAATCTGC TCGGCGCCTC GGCCTCCGGC
GTGATCGGCG ACGTGCTCGG CTGGCGCGGT GTGCTGGCCG TGCTCGGCGT CCTGGTGATC
GTCGCTGCGT TGGCAGTGTC GTTCGGCTTT CGCAATAAAC CGATGCGTCC TGGCGCACCG
ATGGATCTGG CGGCCTTACG CCGCGGCTAT CGGACCATCT TCAGCAATCC GAATGCTCCG
ATCTGCTTCG CAGCAGTATT GGTCGAGGGG ACCTGCGTGA TGGGGGCGTT CCCCTTCGTC
GCCGCCTTCC TGCACGATCA GGGGCAGGAA TCACTGGCGG TCGCCGGGCT GGTGATCGCG
GGCTTTGCTG TCGGCGGGCT GCTCTACACG CTGACCGTCG CACGACTGCT GCCACGGCTC
GGCGTTCGGG GCATGATGAT CGGTGGCGGC GCGCTGGTCG GCCTGCAGTT GGCGATCATC
GCGTTCGGGC CCCCGTGGCA GGCCCAGGCC GTGGCGTTCG TGGCGATGGG GATGGGCTTC
TACATGCTGC ACGGCTGCGT GCAGGTGTTC GCCAGCGAGC TCAGTGAGAC CGCGCGCGGC
ACCGCGATGT CGCTGCATTC GTTCTTTTTC TTCCTCGGCC AGACGACCGG CCCGATCGCC
TACGGCTTCG GCCTCGCTCA TGCCGGTAAA GTTCCCACGA TGCTGATTGC CGCCATCACG
ATGCTGGCGC TGGGGTTTAT TCTTGCGGTG GTGTTGCGAC CGCGACCGCC GACTGATGCG
GTCGAGAGCC CACGGCCGGA TCCTGCGTGA
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| Protein sequence | MSQGDSAVVR PSLPPALKII ALSGFAASLS ARALDPVLPR IASEFSVSIA TAAGLAAVTA
FTFAVVQPAI GALADMFGKA RLMIVCLALL GFASLLGAVS SSFEVLFLCR ILAGIGAGGV
FPVALGLTSD LVEPGRRQVA IGRVLGGSMT GNLLGASASG VIGDVLGWRG VLAVLGVLVI
VAALAVSFGF RNKPMRPGAP MDLAALRRGY RTIFSNPNAP ICFAAVLVEG TCVMGAFPFV
AAFLHDQGQE SLAVAGLVIA GFAVGGLLYT LTVARLLPRL GVRGMMIGGG ALVGLQLAII
AFGPPWQAQA VAFVAMGMGF YMLHGCVQVF ASELSETARG TAMSLHSFFF FLGQTTGPIA
YGFGLAHAGK VPTMLIAAIT MLALGFILAV VLRPRPPTDA VESPRPDPA
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