| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2729 |
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| Symbol | |
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| ID | 3910522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 3113196 |
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| End bp | 3114059 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637884629 |
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| Product | phytoene synthase |
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| Protein accession | YP_486342 |
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| Protein GI | 86749846 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.241637 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.249922 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGCA ACGCCGGCGA CGACGCCGCC GCGGCATTCT GCGCCGAACT GGTGCGCAGC
CACGATTTCG ACCGCTACGC CGCGACGCTG TTCGTCGAGC CGCCGCGCCG GCGCGCGCTG
CTGGCGCTGT ACGCCTTCAA CGTCGAGGTG GTGCGCGTCC GCGACCAGGT CAGCCAGCCG
CTGCCGGGCG AAATCCGGCT GCAATGGTGG ACCGACACGC TGGCCGGCAC CGCGCATGGC
GGCATCGAAG GCAATCCGGT CGCGGCCGAA TTGTTGCGCG CGACCGGGCA GCACGGGCTG
CCGGTCGCGG CTCTGGCGCA ACTGATCGAA ACGCATCTGT TCGACCTCTA CAACGACCCG
ATGCCGACGC TGACCGTGCT GGAAGCCTAT GCGGCCGATA CCGACGGCGC GCTGTTCGCG
CTGGCGGCGC GGATCCTCGA TCAGGGCTCG GAGGCGGTCG ACCATCTCGC CCGCCATGCC
GGGGTGGCGC AGGGATTCGC GCGCGCGATC GCGCGGCTGC CGATCGATGC AGCGCGACGG
CAGTGCTTCG TCCCGCTCGA GCTTTTGGCG GCGCACGGCA GCAGCGAGGC CGAGGTCTAT
GCCGGCCGCG CCACACCGGC GCTACGGCTG ACGCTCGACG CGCTGATCGC CGAGGCGCAG
CGCCATTGCG ACGCCGCGCT GCGGCTGCTC GCCGAAGTGC CGCCACCGGC GCGCCGCGCG
TTCCTGCCGC TGGCGCTGGC GCAGCGCGAT CTCGACCGGC TGGCGCAGCC CGGCACCGAC
CTGTTCGCGC CGCACGAGCG CTCCCGTCTG GCGACGCTGT GGACCCTGTG GAAGGCGTCG
CGGACGCGGG CGTTTCGGCA ATAA
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| Protein sequence | MSGNAGDDAA AAFCAELVRS HDFDRYAATL FVEPPRRRAL LALYAFNVEV VRVRDQVSQP
LPGEIRLQWW TDTLAGTAHG GIEGNPVAAE LLRATGQHGL PVAALAQLIE THLFDLYNDP
MPTLTVLEAY AADTDGALFA LAARILDQGS EAVDHLARHA GVAQGFARAI ARLPIDAARR
QCFVPLELLA AHGSSEAEVY AGRATPALRL TLDALIAEAQ RHCDAALRLL AEVPPPARRA
FLPLALAQRD LDRLAQPGTD LFAPHERSRL ATLWTLWKAS RTRAFRQ
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